RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	CHST3	Q7LGC8	479 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	FSIP1	Q8NA03	581 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	APPBP2	Q92624	585 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	DHX16	O60231	1041 aa	Known RBP	27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	NEMF	O60524	1076 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	ME1	P48163	572 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	ADAL	Q6DHV7	355 aa		27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	CCDC94	Q9BW85	323 aa	Predicted RBP	27.34	■■□□□ 1.97
GSDMD-208	ENST00000528475	CTIF	O43310	598 aa	Known RBP	27.33	■■□□□ 1.97
GSDMD-208	ENST00000528475	PCCA	P05165	728 aa	Predicted RBP	27.33	■■□□□ 1.97
GSDMD-208	ENST00000528475	CSF1R	P07333	972 aa		27.33	■■□□□ 1.97
GSDMD-208	ENST00000528475	GORAB	Q5T7V8	394 aa		27.33	■■□□□ 1.97
GSDMD-208	ENST00000528475	BCL2L12	Q9HB09	334 aa		27.33	■■□□□ 1.97
GSDMD-208	ENST00000528475	IL2RB	P14784	551 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	ADORA1	P30542	326 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	FMR1NB	Q8N0W7	255 aa	Predicted RBP	27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	CACTIN	Q8WUQ7	758 aa	Known RBP	27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	MRPS27	Q92552	414 aa	Known RBP	27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	PRDM11	Q9NQV5	511 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	GUCY1B3	Q02153	619 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	TSC1	Q92574	1164 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	CARD10	Q9BWT7	1032 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	PCDHA7	Q9UN72	937 aa		27.32	■■□□□ 1.96
GSDMD-208	ENST00000528475	FGA	P02671	866 aa		27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	CCDC144B	Q3MJ40	725 aa		27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	DHX40	Q8IX18	779 aa	Known RBP	27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	CCDC144CP	Q8IYA2	1237 aa		27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	YEATS4	O95619	227 aa		27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	WASHC4	Q2M389	1173 aa		27.31	■■□□□ 1.96
GSDMD-208	ENST00000528475	PRC1	O43663	620 aa		27.3	■■□□□ 1.96
GSDMD-208	ENST00000528475	BRAP	Q7Z569	592 aa		27.3	■■□□□ 1.96
GSDMD-208	ENST00000528475	LINC00301	Q8NCQ3	95 aa		27.3	■■□□□ 1.96
GSDMD-208	ENST00000528475	POLR3E	Q9NVU0	708 aa		27.3	■■□□□ 1.96
GSDMD-208	ENST00000528475	HPS5	Q9UPZ3	1129 aa		27.3	■■□□□ 1.96
GSDMD-208	ENST00000528475	BECN2	A8MW95	431 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	CEP57L1	Q8IYX8	460 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	NCOA7	Q8NI08	942 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	KCNG4	Q8TDN1	519 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	MYH7	P12883	1935 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	FBXO18	Q8NFZ0	1043 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	C8orf76	Q96K31	380 aa		27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	NAT10	Q9H0A0	1025 aa	Known RBP	27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	GPHN	Q9NQX3	736 aa	Predicted RBP	27.29	■■□□□ 1.96
GSDMD-208	ENST00000528475	ZAP70	P43403	619 aa		27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	RBM6	P78332	1123 aa	Known RBP	27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	SCARF1	Q14162	830 aa		27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	LRRC8A	Q8IWT6	810 aa		27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	KLF18	A0A0U1RQI7	1052 aa		27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	ANKRD7	Q92527	254 aa		27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	SOS2	Q07890	1332 aa	Predicted RBP	27.28	■■□□□ 1.96
GSDMD-208	ENST00000528475	RIC1	Q4ADV7	1423 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	SMTNL1	A8MU46	457 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	ANTXR2	P58335	489 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	HAND2	P61296	217 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	IFIT5	Q13325	482 aa	Known RBP	27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	SYCP1	Q15431	976 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	ZNF512B	Q96KM6	892 aa	Predicted RBP	27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	ZMYND15	Q9H091	742 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	PUS7L	Q9H0K6	701 aa	Known RBP	27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	CDHR2	Q9BYE9	1310 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	TOGARAM1	Q9Y4F4	1720 aa		27.27	■■□□□ 1.96
GSDMD-208	ENST00000528475	ORC3	Q9UBD5	711 aa	Predicted RBP	27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	GOLGA8B	A8MQT2	603 aa		27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	TAF7L	Q5H9L4	462 aa		27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	KIF6	Q6ZMV9	814 aa		27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	BPIFA3	Q9BQP9	254 aa		27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	PAXBP1	Q9Y5B6	917 aa		27.26	■■□□□ 1.95
GSDMD-208	ENST00000528475	ATRN	O75882	1429 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	ZNF213	O14771	459 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	GPAA1	O43292	621 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	STK38	Q15208	465 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	MYSM1	Q5VVJ2	828 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	RALYL	Q86SE5	291 aa	Known RBP	27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	C4A	P0C0L4	1744 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	C4B	P0C0L5	1744 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	TNNT1	P13805	278 aa		27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	27.25	■■□□□ 1.95
GSDMD-208	ENST00000528475	PPFIA3	O75145	1194 aa		27.24	■■□□□ 1.95
GSDMD-208	ENST00000528475	C16orf45	Q96MC5	204 aa	Predicted RBP	27.24	■■□□□ 1.95
GSDMD-208	ENST00000528475	RIPOR2	Q9Y4F9	1068 aa		27.24	■■□□□ 1.95
GSDMD-208	ENST00000528475	CLIC4	Q9Y696	253 aa		27.24	■■□□□ 1.95
GSDMD-208	ENST00000528475	NDUFA8	P51970	172 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	ATP2B3	Q16720	1220 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	FAM89A	Q96GI7	184 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	KIAA1468	Q9P260	1216 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	SPTLC2	O15270	562 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	SF3A1	Q15459	793 aa	Known RBP	27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	SDF4	Q9BRK5	362 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475	TMOD3	Q9NYL9	352 aa		27.23	■■□□□ 1.95
GSDMD-208	ENST00000528475		A0A1B0GVL5	298 aa		27.22	■■□□□ 1.95
GSDMD-208	ENST00000528475	CPLX1	O14810	134 aa		27.22	■■□□□ 1.95
GSDMD-208	ENST00000528475	OTUD7B	Q6GQQ9	843 aa		27.22	■■□□□ 1.95
GSDMD-208	ENST00000528475	KCND1	Q9NSA2	647 aa		27.22	■■□□□ 1.95
GSDMD-208	ENST00000528475	AKAP11	Q9UKA4	1901 aa		27.22	■■□□□ 1.95
GSDMD-208	ENST00000528475	NEDD4	P46934	1319 aa		27.22	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms