RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	TAF5L	O75529	589 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	SLC4A2	P04920	1241 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	ZBTB48	P10074	688 aa	Predicted RBP	14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	KCNJ4	P48050	445 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	MTMR14	Q8NCE2	650 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	HELB	Q8NG08	1087 aa	Predicted RBP	14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	WNK4	Q96J92	1243 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	TRIM17	Q9Y577	477 aa		14.03	□□□□□ -0.16
RBM4-210	ENST00000528039	CLRN2	A0PK11	232 aa		14.02	□□□□□ -0.17
RBM4-210	ENST00000528039		F8W031	263 aa	Predicted RBP	14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	GJA5	P36382	358 aa		14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	INHBE	P58166	350 aa		14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	TWISTNB	Q3B726	338 aa	Predicted RBP	14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	CFAP100	Q494V2	611 aa		14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	PRMT6	Q96LA8	375 aa	Predicted RBP	14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	JAG2	Q9Y219	1238 aa		14.02	□□□□□ -0.17
RBM4-210	ENST00000528039	SPDYE2B	A6NHP3	402 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	SPDYE6	P0CI01	402 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	CAP1	Q01518	475 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	FLII	Q13045	1269 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	NBPF12	Q5TAG4	269 aa	Predicted RBP	14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	PTPN18	Q99952	460 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	PPP2R3B	Q9Y5P8	575 aa		14.01	□□□□□ -0.17
RBM4-210	ENST00000528039	PPP1R12B	O60237	982 aa	Predicted RBP	14	□□□□□ -0.17
RBM4-210	ENST00000528039	USP2	O75604	605 aa	Predicted RBP	14	□□□□□ -0.17
RBM4-210	ENST00000528039	IL1R1	P14778	569 aa		14	□□□□□ -0.17
RBM4-210	ENST00000528039	CRHR2	Q13324	411 aa		14	□□□□□ -0.17
RBM4-210	ENST00000528039	C15orf52	Q6ZUT6	534 aa	Known RBP	14	□□□□□ -0.17
RBM4-210	ENST00000528039	CD99L2	Q8TCZ2	262 aa		14	□□□□□ -0.17
RBM4-210	ENST00000528039	VEZT	Q9HBM0	779 aa		14	□□□□□ -0.17
RBM4-210	ENST00000528039	PTPN22	Q9Y2R2	807 aa		14	□□□□□ -0.17
RBM4-210	ENST00000528039	LAMB1	P07942	1786 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	ANKRD18B	A2A2Z9	1011 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	FOXO4	P98177	505 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	SUPT20HL1	Q3ZLR7	823 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	HABP4	Q5JVS0	413 aa	Known RBP	13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	INTS3	Q68E01	1043 aa	Known RBP	13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	LINS1	Q8NG48	757 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	DNAAF4	Q8WXU2	420 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	MYH16	Q9H6N6	1097 aa		13.99	□□□□□ -0.17
RBM4-210	ENST00000528039	UNCX	A6NJT0	531 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	MYO1B	O43795	1136 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	FKBP5	Q13451	457 aa	Predicted RBP	13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	RASA3	Q14644	834 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	WWC1	Q8IX03	1113 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	GCC1	Q96CN9	775 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	ERO1A	Q96HE7	468 aa		13.98	□□□□□ -0.17
RBM4-210	ENST00000528039	ECM29	Q5VYK3	1845 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039		A0A1B0GUL6	1792 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	SZT2	Q5T011	3432 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	TESPA1	A2RU30	521 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	EN2	P19622	333 aa	Predicted RBP	13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	IREB2	P48200	963 aa	Known RBP	13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	FKBP1A	P62942	108 aa	Known RBP	13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	IFIT5	Q13325	482 aa	Known RBP	13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	CCDC184	Q52MB2	194 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	ZNF804A	Q7Z570	1209 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	CDAN1	Q8IWY9	1227 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	ANKRD13A	Q8IZ07	590 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	ELP3	Q9H9T3	547 aa		13.97	□□□□□ -0.17
RBM4-210	ENST00000528039	RBM5	P52756	815 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	SP3	Q02447	781 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	CCDC27	Q2M243	656 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	EPHA10	Q5JZY3	1008 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	CNKSR2	Q8WXI2	1034 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	ARMC5	Q96C12	935 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	ZNF594	Q96JF6	807 aa	Predicted RBP	13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	EFCC1	Q9HA90	598 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039	CHMP3	Q9Y3E7	222 aa		13.96	□□□□□ -0.17
RBM4-210	ENST00000528039		F6X3S4	739 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	PLIN1	O60240	522 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	OTUD7B	Q6GQQ9	843 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	LMBR1L	Q6UX01	489 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	OPTN	Q96CV9	577 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	MS4A4A	Q96JQ5	239 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	TEPSIN	Q96N21	525 aa		13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	ZNF70	Q9UC06	446 aa	Predicted RBP	13.95	□□□□□ -0.18
RBM4-210	ENST00000528039	OTOF	Q9HC10	1997 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	FANCI	Q9NVI1	1328 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	VAMP4	O75379	141 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	RANBP2	P49792	3224 aa	Known RBP	13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	SPDYE2	Q495Y8	402 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	BEND3	Q5T5X7	828 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	LDHAL6A	Q6ZMR3	332 aa		13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	TDRD3	Q9H7E2	651 aa	Known RBP	13.94	□□□□□ -0.18
RBM4-210	ENST00000528039	IL16	Q14005	1332 aa		13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	FAM205A	Q6ZU69	1335 aa		13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	MFSD14B	Q5SR56	506 aa		13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	BRI3BP	Q8WY22	251 aa		13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	SERPINA10	Q9UK55	444 aa		13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	TTF2	Q9UNY4	1162 aa	Known RBP	13.93	□□□□□ -0.18
RBM4-210	ENST00000528039	TCP10L2	B9ZVM9	353 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	GYG1	P46976	350 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	VGLL4	Q14135	290 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	GRIK5	Q16478	980 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	CCDC57	Q2TAC2	916 aa		13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	TDRD7	Q8NHU6	1098 aa	Known RBP	13.92	□□□□□ -0.18
RBM4-210	ENST00000528039	ZNF333	Q96JL9	665 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms