RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 AOX1Q06278 1338 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
PRPF40B-204ENST00000527253 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 MOB2Q70IA6 237 aa13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 C2orf69Q8N8R5 385 aa13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
PRPF40B-204ENST00000527253 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 MMP14P50281 582 aa13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
PRPF40B-204ENST00000527253 PDE8BO95263 885 aa13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 FKBP1AP62942 108 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 GRIK5Q16478 980 aa13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 MTMR14Q8NCE2 650 aa13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 HDAC9Q9UKV0 1011 aa13.1□□□□□ -0.31
PRPF40B-204ENST00000527253 EYA2O00167 538 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 BCAR3O75815 825 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 FGFR2P21802 821 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 PRMT6Q96LA8 375 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 MEIS3Q99687 375 aa13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-204ENST00000527253 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 SLC10A3P09131 477 aa13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 UBTFL1P0CB47 393 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 BCAMP50895 628 aa13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 NOGQ13253 232 aa13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-204ENST00000527253 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 CAPN15O75808 1086 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 FKBP1BP68106 108 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 RASAL3Q86YV0 1011 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
PRPF40B-204ENST00000527253 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 TRIM27P14373 513 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 BEGAINQ9BUH8 593 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 SIL1Q9H173 461 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 PA2G4Q9UQ80 394 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 PAPPA2Q9BXP8 1791 aa13.06□□□□□ -0.32
PRPF40B-204ENST00000527253 CHAF1AQ13111 956 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-204ENST00000527253 PRKG1Q13976 671 aa13.05□□□□□ -0.32
PRPF40B-204ENST00000527253 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-204ENST00000527253 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
PRPF40B-204ENST00000527253 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
PRPF40B-204ENST00000527253 SSC5DA1L4H1 1573 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 CIAO1O76071 339 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 RBM5P52756 815 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 CAVIN4Q5BKX8 364 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 FRAT1Q92837 279 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
PRPF40B-204ENST00000527253 CA12O43570 354 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 CRKP46108 304 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 LDLRAD1Q5T700 205 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 LPIN2Q92539 896 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 TDRD3Q9H7E2 651 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 RNF186Q9NXI6 227 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-204ENST00000527253 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 NF2P35240 595 aa13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 ANGEL1Q9UNK9 670 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.33
PRPF40B-204ENST00000527253 MYO1BO43795 1136 aa13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 FRAT2O75474 233 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-204ENST00000527253 TRPA1O75762 1119 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms