RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
CTSB-214ENST00000527243 ZBED3Q96IU2 234 aaPredicted RBP13.93□□□□□ -0.18
CTSB-214ENST00000527243 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
CTSB-214ENST00000527243 NOP58Q9Y2X3 529 aaKnown RBP13.93□□□□□ -0.18
CTSB-214ENST00000527243 SLC5A1P13866 664 aa13.92□□□□□ -0.18
CTSB-214ENST00000527243 ATP2B3Q16720 1220 aa13.92□□□□□ -0.18
CTSB-214ENST00000527243 MYOZ2Q9NPC6 264 aa13.92□□□□□ -0.18
CTSB-214ENST00000527243 ASTN2O75129 1339 aaPredicted RBP13.91□□□□□ -0.18
CTSB-214ENST00000527243 HTRA3P83110 453 aa13.91□□□□□ -0.18
CTSB-214ENST00000527243 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTSB-214ENST00000527243 TFCP2Q12800 502 aa13.91□□□□□ -0.18
CTSB-214ENST00000527243 CAVIN4Q5BKX8 364 aa13.91□□□□□ -0.18
CTSB-214ENST00000527243 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
CTSB-214ENST00000527243 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
CTSB-214ENST00000527243 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
CTSB-214ENST00000527243 TRAF5O00463 557 aa13.9□□□□□ -0.18
CTSB-214ENST00000527243 ADORA1P30542 326 aa13.9□□□□□ -0.18
CTSB-214ENST00000527243 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
CTSB-214ENST00000527243 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
CTSB-214ENST00000527243 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
CTSB-214ENST00000527243 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
CTSB-214ENST00000527243 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
CTSB-214ENST00000527243 WNT10BO00744 389 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 SCARF1Q14162 830 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 GRIK5Q16478 980 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 ERICH6BQ5W0A0 696 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 CDC37L1Q7L3B6 337 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 MTMR14Q8NCE2 650 aa13.89□□□□□ -0.19
CTSB-214ENST00000527243 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
CTSB-214ENST00000527243 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 PHKA1P46020 1223 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 RRP1P56182 461 aaKnown RBP13.88□□□□□ -0.19
CTSB-214ENST00000527243 TIMM10P62072 90 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 G3BP1Q13283 466 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTSB-214ENST00000527243 NBPF9Q3BBW0 867 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 CST9Q5W186 159 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 VPS37DQ86XT2 251 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 GPR108Q9NPR9 543 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 GGA3Q9NZ52 723 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 PITPNM2Q9BZ72 1349 aa13.88□□□□□ -0.19
CTSB-214ENST00000527243 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 SURF6O75683 361 aaKnown RBP13.87□□□□□ -0.19
CTSB-214ENST00000527243 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 DLK2Q6UY11 383 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
CTSB-214ENST00000527243 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 CHMP4BQ9H444 224 aaKnown RBP13.87□□□□□ -0.19
CTSB-214ENST00000527243 ARAP2Q8WZ64 1704 aa13.87□□□□□ -0.19
CTSB-214ENST00000527243 SEMA3EO15041 775 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 ANGEL2Q5VTE6 544 aaKnown RBP13.86□□□□□ -0.19
CTSB-214ENST00000527243 USP48Q86UV5 1035 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 DCPSQ96C86 337 aaKnown RBP13.86□□□□□ -0.19
CTSB-214ENST00000527243 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 AOX1Q06278 1338 aa13.86□□□□□ -0.19
CTSB-214ENST00000527243 PDS5AQ29RF7 1337 aaKnown RBP13.86□□□□□ -0.19
CTSB-214ENST00000527243 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 CHAF1AQ13111 956 aaPredicted RBP13.85□□□□□ -0.19
CTSB-214ENST00000527243 CFAP100Q494V2 611 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 SERPINA10Q9UK55 444 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 SALL1Q9NSC2 1324 aa13.85□□□□□ -0.19
CTSB-214ENST00000527243 F8W031 263 aaPredicted RBP13.84□□□□□ -0.19
CTSB-214ENST00000527243 HDLBPQ00341 1268 aaKnown RBP13.84□□□□□ -0.19
CTSB-214ENST00000527243 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
CTSB-214ENST00000527243 DLGAP5Q15398 846 aa13.84□□□□□ -0.19
CTSB-214ENST00000527243 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
CTSB-214ENST00000527243 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
CTSB-214ENST00000527243 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
CTSB-214ENST00000527243 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
CTSB-214ENST00000527243 TTF2Q9UNY4 1162 aaKnown RBP13.84□□□□□ -0.19
CTSB-214ENST00000527243 CNTNAP1P78357 1384 aa13.83□□□□□ -0.19
CTSB-214ENST00000527243 RASSF10A6NK89 507 aa13.83□□□□□ -0.2
CTSB-214ENST00000527243 FRAT2O75474 233 aaPredicted RBP13.83□□□□□ -0.2
CTSB-214ENST00000527243 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
CTSB-214ENST00000527243 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
CTSB-214ENST00000527243 SULF1Q8IWU6 871 aa13.83□□□□□ -0.2
CTSB-214ENST00000527243 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
CTSB-214ENST00000527243 EXOC6BQ9Y2D4 811 aa13.83□□□□□ -0.2
CTSB-214ENST00000527243 POLR2AP24928 1970 aaKnown RBP13.83□□□□□ -0.2
CTSB-214ENST00000527243 CRKP46108 304 aa13.82□□□□□ -0.2
CTSB-214ENST00000527243 OS9Q13438 667 aaPredicted RBP13.82□□□□□ -0.2
CTSB-214ENST00000527243 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
CTSB-214ENST00000527243 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
CTSB-214ENST00000527243 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
CTSB-214ENST00000527243 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
CTSB-214ENST00000527243 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
CTSB-214ENST00000527243 TRPM7Q96QT4 1865 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms