RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 TRIM28Q13263 835 aaKnown RBP5.14□□□□□ -1.59
C11orf54-204ENST00000527003 WWC1Q8IX03 1113 aa5.14□□□□□ -1.59
C11orf54-204ENST00000527003 DEPDC4Q8N2C3 294 aa5.14□□□□□ -1.59
C11orf54-204ENST00000527003 FNBP4Q8N3X1 1017 aaPredicted RBP5.14□□□□□ -1.59
C11orf54-204ENST00000527003 MDFIQ99750 246 aa5.14□□□□□ -1.59
C11orf54-204ENST00000527003 NPHP3Q7Z494 1330 aa5.14□□□□□ -1.59
C11orf54-204ENST00000527003 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.14□□□□□ -1.59
C11orf54-204ENST00000527003 NSD3Q9BZ95 1437 aa5.14□□□□□ -1.59
C11orf54-204ENST00000527003 IQSEC2Q5JU85 1478 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 C1orf167Q5SNV9 1468 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 A0A1W2PNR3 127 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 FYB1O15117 783 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 GDF10P55107 478 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 LAMC2Q13753 1193 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 NCOA4Q13772 614 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 COL9A3Q14050 684 aaPredicted RBP5.13□□□□□ -1.59
C11orf54-204ENST00000527003 HDGFL1Q5TGJ6 251 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 MORC1Q86VD1 984 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 NLRP13Q86W25 1043 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 PMFBP1Q8TBY8 1022 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 COG3Q96JB2 828 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 PCDHGA11Q9Y5H2 935 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 TTC21BQ7Z4L5 1316 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 MYBBP1AQ9BQG0 1328 aaKnown RBP5.13□□□□□ -1.59
C11orf54-204ENST00000527003 USP6P35125 1406 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 MST1RQ04912 1400 aa5.13□□□□□ -1.59
C11orf54-204ENST00000527003 ADARB2-AS1A8MUL3 147 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 TMEM229AB2RXF0 380 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 C9orf172C9J069 976 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 M0R082 166 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 FOXO3O43524 673 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 COBLO75128 1261 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 ADGRE1Q14246 886 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 ARSJQ5FYB0 599 aaPredicted RBP5.12□□□□□ -1.59
C11orf54-204ENST00000527003 CC2D1BQ5T0F9 858 aaKnown RBP5.12□□□□□ -1.59
C11orf54-204ENST00000527003 SAMD5Q5TGI4 173 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 KRT28Q7Z3Y7 464 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.12□□□□□ -1.59
C11orf54-204ENST00000527003 ZNF417Q8TAU3 575 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 ORAI2Q96SN7 254 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 ZNF587Q96SQ5 575 aaPredicted RBP5.12□□□□□ -1.59
C11orf54-204ENST00000527003 NIFKQ9BYG3 293 aaKnown RBP5.12□□□□□ -1.59
C11orf54-204ENST00000527003 MARK1Q9P0L2 795 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 USP3Q9Y6I4 520 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 SBNO1A3KN83 1393 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 PARD3Q8TEW0 1356 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 SSH2Q76I76 1423 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 CD163L1Q9NR16 1453 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 LTBP4Q8N2S1 1624 aa5.12□□□□□ -1.59
C11orf54-204ENST00000527003 PAX4O43316 350 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 SIN3BO75182 1162 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 INHAP05111 366 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 ELNP15502 786 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 TXKP42681 527 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 GTF2IP78347 998 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 MBTPS1Q14703 1052 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 GRIK4Q16099 956 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 EML3Q32P44 896 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 BRINP3Q76B58 766 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 SYT9Q86SS6 491 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 TXNRD3Q86VQ6 643 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 ABTB2Q8N961 1025 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 NFATC2IPQ8NCF5 419 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 KCNH5Q8NCM2 988 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 GLMNQ92990 594 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 AIDAQ96BJ3 306 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 CFAP53Q96M91 514 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 SERTAD1Q9UHV2 236 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 ARHGEF10O15013 1369 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 AATKQ6ZMQ8 1374 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 USP31Q70CQ4 1352 aa5.11□□□□□ -1.59
C11orf54-204ENST00000527003 USP17L3A6NCW0 530 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 USP17L4A6NCW7 530 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 EFSO43281 561 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 NID1P14543 1247 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 YBX3P16989 372 aaKnown RBP eCLIP5.1□□□□□ -1.59
C11orf54-204ENST00000527003 TATP17735 454 aaPredicted RBP5.1□□□□□ -1.59
C11orf54-204ENST00000527003 PPP2R1AP30153 589 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 KIF24Q5T7B8 1368 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 USP17L2Q6R6M4 530 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 USP17L1Q7RTZ2 530 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 LRRC59Q96AG4 307 aaKnown RBP5.1□□□□□ -1.59
C11orf54-204ENST00000527003 GGNBP2Q9H3C7 697 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 ZDHHC3Q9NYG2 299 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 FMN2Q9NZ56 1722 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 KIAA1024Q9UPX6 916 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 NOD1Q9Y239 953 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 GJA3Q9Y6H8 435 aa5.1□□□□□ -1.59
C11orf54-204ENST00000527003 NALCNQ8IZF0 1738 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 USP32Q8NFA0 1604 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 SPATA31A3Q5VYP0 1347 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 UBAP1LF5GYI3 381 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 ATP9BO43861 1147 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 ALBP02768 609 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 NRG1Q02297 640 aaPredicted RBP5.09□□□□□ -1.59
C11orf54-204ENST00000527003 NME9Q86XW9 330 aa5.09□□□□□ -1.59
C11orf54-204ENST00000527003 PLEKHM2Q8IWE5 1019 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms