RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 STRIP1Q5VSL9 837 aa23.98■■□□□ 1.43
PKP3-204ENST00000526971 CTU1Q7Z7A3 348 aaKnown RBP23.97■■□□□ 1.43
PKP3-204ENST00000526971 MYO3BQ8WXR4 1341 aa23.97■■□□□ 1.43
PKP3-204ENST00000526971 ZNF804BA4D1E1 1349 aa23.96■■□□□ 1.43
PKP3-204ENST00000526971 REM2Q8IYK8 340 aaPredicted RBP23.96■■□□□ 1.43
PKP3-204ENST00000526971 FRAT1Q92837 279 aaPredicted RBP23.96■■□□□ 1.43
PKP3-204ENST00000526971 MPHOSPH8Q99549 860 aa23.96■■□□□ 1.43
PKP3-204ENST00000526971 LEMD3Q9Y2U8 911 aa23.96■■□□□ 1.43
PKP3-204ENST00000526971 CCDC57Q2TAC2 916 aa23.95■■□□□ 1.42
PKP3-204ENST00000526971 ATF7IPQ6VMQ6 1270 aa23.95■■□□□ 1.42
PKP3-204ENST00000526971 IRS2Q9Y4H2 1338 aa23.94■■□□□ 1.42
PKP3-204ENST00000526971 TRIM27P14373 513 aa23.94■■□□□ 1.42
PKP3-204ENST00000526971 TTLL12Q14166 644 aaPredicted RBP23.94■■□□□ 1.42
PKP3-204ENST00000526971 RABL6Q3YEC7 729 aaPredicted RBP23.94■■□□□ 1.42
PKP3-204ENST00000526971 INTS3Q68E01 1043 aaKnown RBP23.94■■□□□ 1.42
PKP3-204ENST00000526971 KIAA0825Q8IV33 1275 aa23.94■■□□□ 1.42
PKP3-204ENST00000526971 OGFOD1Q8N543 542 aa23.94■■□□□ 1.42
PKP3-204ENST00000526971 ZBED3Q96IU2 234 aaPredicted RBP23.94■■□□□ 1.42
PKP3-204ENST00000526971 BICC1Q9H694 974 aaKnown RBP23.94■■□□□ 1.42
PKP3-204ENST00000526971 LAMB1P07942 1786 aa23.93■■□□□ 1.42
PKP3-204ENST00000526971 SNAP23O00161 211 aa23.93■■□□□ 1.42
PKP3-204ENST00000526971 TBC1D8O95759 1140 aa23.93■■□□□ 1.42
PKP3-204ENST00000526971 MKRN3Q13064 507 aaKnown RBP23.93■■□□□ 1.42
PKP3-204ENST00000526971 TTLL5Q6EMB2 1281 aa23.93■■□□□ 1.42
PKP3-204ENST00000526971 ANKRD44Q8N8A2 993 aa23.93■■□□□ 1.42
PKP3-204ENST00000526971 GTF2IP78347 998 aa23.92■■□□□ 1.42
PKP3-204ENST00000526971 CHRNDQ07001 517 aa23.92■■□□□ 1.42
PKP3-204ENST00000526971 ZKSCAN2Q63HK3 967 aa23.92■■□□□ 1.42
PKP3-204ENST00000526971 ZNF296Q8WUU4 475 aaPredicted RBP23.92■■□□□ 1.42
PKP3-204ENST00000526971 ANKRD2Q9GZV1 360 aa23.92■■□□□ 1.42
PKP3-204ENST00000526971 SSC5DA1L4H1 1573 aa23.91■■□□□ 1.42
PKP3-204ENST00000526971 PTPN12Q05209 780 aaKnown RBP23.91■■□□□ 1.42
PKP3-204ENST00000526971 TAF7LQ5H9L4 462 aa23.91■■□□□ 1.42
PKP3-204ENST00000526971 ZNF594Q96JF6 807 aaPredicted RBP23.91■■□□□ 1.42
PKP3-204ENST00000526971 FZD1Q9UP38 647 aa23.91■■□□□ 1.42
PKP3-204ENST00000526971 TNNQ9UQP3 1299 aa23.91■■□□□ 1.42
PKP3-204ENST00000526971 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
PKP3-204ENST00000526971 TM4SF4P48230 202 aa23.9■■□□□ 1.42
PKP3-204ENST00000526971 PRKG1Q13976 671 aa23.9■■□□□ 1.42
PKP3-204ENST00000526971 CERS5Q8N5B7 392 aa23.9■■□□□ 1.42
PKP3-204ENST00000526971 HPS5Q9UPZ3 1129 aa23.9■■□□□ 1.42
PKP3-204ENST00000526971 PCDHAC2Q9Y5I4 1007 aa23.9■■□□□ 1.42
PKP3-204ENST00000526971 LDHAL6AQ6ZMR3 332 aa23.89■■□□□ 1.41
PKP3-204ENST00000526971 APOBEC3FQ8IUX4 373 aaKnown RBP23.89■■□□□ 1.41
PKP3-204ENST00000526971 CD209Q9NNX6 404 aa23.89■■□□□ 1.41
PKP3-204ENST00000526971 NF2P35240 595 aa23.88■■□□□ 1.41
PKP3-204ENST00000526971 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
PKP3-204ENST00000526971 R3HDMLQ9H3Y0 253 aa23.88■■□□□ 1.41
PKP3-204ENST00000526971 HDAC5Q9UQL6 1122 aa23.88■■□□□ 1.41
PKP3-204ENST00000526971 COL1A1P02452 1464 aaPredicted RBP23.87■■□□□ 1.41
PKP3-204ENST00000526971 TAF5LO75529 589 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 KCNJ4P48050 445 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 LDLRAD1Q5T700 205 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 HELBQ8NG08 1087 aaPredicted RBP23.87■■□□□ 1.41
PKP3-204ENST00000526971 MEIS3Q99687 375 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 CNNM1Q9NRU3 951 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 HDAC9Q9UKV0 1011 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 HTTP42858 3142 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 OTOFQ9HC10 1997 aa23.87■■□□□ 1.41
PKP3-204ENST00000526971 AOX1Q06278 1338 aa23.86■■□□□ 1.41
PKP3-204ENST00000526971 GPR25O00155 361 aa23.86■■□□□ 1.41
PKP3-204ENST00000526971 MMP14P50281 582 aa23.86■■□□□ 1.41
PKP3-204ENST00000526971 ARMC9Q7Z3E5 817 aa23.85■■□□□ 1.41
PKP3-204ENST00000526971 ANGEL1Q9UNK9 670 aaKnown RBP23.85■■□□□ 1.41
PKP3-204ENST00000526971 ARAP2Q8WZ64 1704 aa23.84■■□□□ 1.41
PKP3-204ENST00000526971 GNAI3P08754 354 aa23.84■■□□□ 1.41
PKP3-204ENST00000526971 SPRYD7Q5W111 196 aa23.84■■□□□ 1.41
PKP3-204ENST00000526971 C15orf52Q6ZUT6 534 aaKnown RBP23.84■■□□□ 1.41
PKP3-204ENST00000526971 DEFB129Q9H1M3 183 aa23.84■■□□□ 1.41
PKP3-204ENST00000526971 LRRFIP2Q9Y608 721 aaKnown RBP23.84■■□□□ 1.41
PKP3-204ENST00000526971 SREBF2Q12772 1141 aa23.83■■□□□ 1.41
PKP3-204ENST00000526971 NOM1Q5C9Z4 860 aaKnown RBP23.83■■□□□ 1.41
PKP3-204ENST00000526971 TMEM57Q8N5G2 664 aa23.83■■□□□ 1.41
PKP3-204ENST00000526971 MTMR14Q8NCE2 650 aa23.83■■□□□ 1.41
PKP3-204ENST00000526971 CFHR5Q9BXR6 569 aa23.83■■□□□ 1.41
PKP3-204ENST00000526971 PUS3Q9BZE2 481 aaKnown RBP23.83■■□□□ 1.41
PKP3-204ENST00000526971 JAG2Q9Y219 1238 aa23.83■■□□□ 1.41
PKP3-204ENST00000526971 F8W031 263 aaPredicted RBP23.82■■□□□ 1.4
PKP3-204ENST00000526971 DLGAP5Q15398 846 aa23.82■■□□□ 1.4
PKP3-204ENST00000526971 PKN2Q16513 984 aaKnown RBP23.82■■□□□ 1.4
PKP3-204ENST00000526971 DZIP1LQ8IYY4 767 aaKnown RBP23.82■■□□□ 1.4
PKP3-204ENST00000526971 CLMNQ96JQ2 1002 aa23.82■■□□□ 1.4
PKP3-204ENST00000526971 RIPOR2Q9Y4F9 1068 aa23.82■■□□□ 1.4
PKP3-204ENST00000526971 IL1R1P14778 569 aa23.81■■□□□ 1.4
PKP3-204ENST00000526971 RFX5P48382 616 aaPredicted RBP23.81■■□□□ 1.4
PKP3-204ENST00000526971 FTSJ3Q8IY81 847 aaKnown RBP23.81■■□□□ 1.4
PKP3-204ENST00000526971 CLRN2A0PK11 232 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 PLIN1O60240 522 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 MAP3K11Q16584 847 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 CFAP100Q494V2 611 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 KLHDC4Q8TBB5 520 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 RCAN3Q9UKA8 241 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 MROH5Q6ZUA9 1318 aa23.8■■□□□ 1.4
PKP3-204ENST00000526971 SPDYE2BA6NHP3 402 aa23.79■■□□□ 1.4
PKP3-204ENST00000526971 SPDYE6P0CI01 402 aa23.79■■□□□ 1.4
PKP3-204ENST00000526971 LRRC24Q50LG9 513 aa23.79■■□□□ 1.4
PKP3-204ENST00000526971 PRMT6Q96LA8 375 aaPredicted RBP23.79■■□□□ 1.4
PKP3-204ENST00000526971 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.79■■□□□ 1.4
PKP3-204ENST00000526971 FKTNO75072 461 aa23.78■■□□□ 1.4
PKP3-204ENST00000526971 RLBP1P12271 317 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms