RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
VPS11-202ENST00000526829 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
VPS11-202ENST00000526829 KCNQ5Q9NR82 932 aa13.49□□□□□ -0.25
VPS11-202ENST00000526829 PDE8AO60658 829 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 EGFRP00533 1210 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 MRE11P49959 708 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
VPS11-202ENST00000526829 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
VPS11-202ENST00000526829 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
VPS11-202ENST00000526829 VIL1P09327 827 aaKnown RBP13.47□□□□□ -0.25
VPS11-202ENST00000526829 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
VPS11-202ENST00000526829 TBC1D10BQ4KMP7 808 aaPredicted RBP13.47□□□□□ -0.25
VPS11-202ENST00000526829 TMTC2Q8N394 836 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
VPS11-202ENST00000526829 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 CA12O43570 354 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 MCM4P33991 863 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 NEXNQ0ZGT2 675 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 SEMA3FQ13275 785 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 ANKIB1Q9P2G1 1089 aa13.47□□□□□ -0.25
VPS11-202ENST00000526829 UFL1O94874 794 aa13.46□□□□□ -0.25
VPS11-202ENST00000526829 DLK2Q6UY11 383 aa13.46□□□□□ -0.25
VPS11-202ENST00000526829 GGA1Q9UJY5 639 aa13.46□□□□□ -0.25
VPS11-202ENST00000526829 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 TSPYL6Q8N831 410 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 UPF2Q9HAU5 1272 aaKnown RBP13.45□□□□□ -0.26
VPS11-202ENST00000526829 MYH3P11055 1940 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 IRF6O14896 467 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 SEC24BO95487 1268 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 HUNKP57058 714 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 ZNF280AP59817 542 aaPredicted RBP13.45□□□□□ -0.26
VPS11-202ENST00000526829 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
VPS11-202ENST00000526829 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
VPS11-202ENST00000526829 XDHP47989 1333 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 IGHDP01880 384 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 NOGQ13253 232 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 PDE3AQ14432 1141 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
VPS11-202ENST00000526829 TSKSQ9UJT2 592 aa13.44□□□□□ -0.26
VPS11-202ENST00000526829 ADM5C9JUS6 153 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 E9PSI1 815 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 RSBN1LQ6PCB5 846 aaPredicted RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 AGBL3Q8NEM8 1001 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 PANK2Q9BZ23 570 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 ZNF646O15015 1829 aaPredicted RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 ESPNB1AK53 854 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 FAM155AB1AL88 458 aaPredicted RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 CTSWP56202 376 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 RGMBQ6NW40 437 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 GMLQ99445 158 aa13.43□□□□□ -0.26
VPS11-202ENST00000526829 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
VPS11-202ENST00000526829 SPEF2Q9C093 1822 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 TTLL11Q8NHH1 800 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 CASP8AP2Q9UKL3 1982 aa13.42□□□□□ -0.26
VPS11-202ENST00000526829 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 C2orf69Q8N8R5 385 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
VPS11-202ENST00000526829 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 ASTN2O75129 1339 aaPredicted RBP13.41□□□□□ -0.26
VPS11-202ENST00000526829 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 TRAK2O60296 914 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 TWISTNBQ3B726 338 aaPredicted RBP13.41□□□□□ -0.26
VPS11-202ENST00000526829 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
VPS11-202ENST00000526829 IL16Q14005 1332 aa13.41□□□□□ -0.26
VPS11-202ENST00000526829 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 H7C1W4 665 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 CDCA5Q96FF9 252 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 GREM2Q9H772 168 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 MINPP1Q9UNW1 487 aa13.4□□□□□ -0.26
VPS11-202ENST00000526829 USP17L3A6NCW0 530 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 USP17L4A6NCW7 530 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 USP17L8P0C7I0 530 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.27
VPS11-202ENST00000526829 TERF1P54274 439 aa13.4□□□□□ -0.27
VPS11-202ENST00000526829 SCARF1Q14162 830 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms