RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 CCDC152Q4G0S7 254 aa17.69■□□□□ 0.42
SSRP1-203ENST00000526696 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
SSRP1-203ENST00000526696 PPP2R3BQ9Y5P8 575 aa17.69■□□□□ 0.42
SSRP1-203ENST00000526696 CCL15-CCL14A0A0B4J2E2 113 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 GJB1P08034 283 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 CCL15Q16663 113 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
SSRP1-203ENST00000526696 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-203ENST00000526696 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
SSRP1-203ENST00000526696 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
SSRP1-203ENST00000526696 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
SSRP1-203ENST00000526696 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-203ENST00000526696 MTMR14Q8NCE2 650 aa17.67■□□□□ 0.42
SSRP1-203ENST00000526696 MTMR10Q9NXD2 777 aa17.67■□□□□ 0.42
SSRP1-203ENST00000526696 TLR2O60603 784 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 PDE8AO60658 829 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 NEFMP07197 916 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 CCL5P13501 91 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 GTF2IP78347 998 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 CDAN1Q8IWY9 1227 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 BABAM1Q9NWV8 329 aa17.66■□□□□ 0.42
SSRP1-203ENST00000526696 FARP2O94887 1054 aaPredicted RBP17.65■□□□□ 0.42
SSRP1-203ENST00000526696 PRMT6Q96LA8 375 aaPredicted RBP17.65■□□□□ 0.42
SSRP1-203ENST00000526696 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 GNRH1P01148 92 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 PRMT2P55345 433 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 RASA3Q14644 834 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
SSRP1-203ENST00000526696 SRRDQ9UH36 339 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 CLSPNQ9HAW4 1339 aa17.64■□□□□ 0.41
SSRP1-203ENST00000526696 EYSQ5T1H1 3165 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 EVI5O60447 810 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
SSRP1-203ENST00000526696 GRK4P32298 578 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 GTF2A2P52657 109 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 KIF22Q14807 665 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 CFAP100Q494V2 611 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.63■□□□□ 0.41
SSRP1-203ENST00000526696 TRIM47Q96LD4 638 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 GDF15Q99988 308 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 RNF208Q9H0X6 261 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 VEZTQ9HBM0 779 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
SSRP1-203ENST00000526696 VGLL4Q14135 290 aa17.62■□□□□ 0.41
SSRP1-203ENST00000526696 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
SSRP1-203ENST00000526696 U2AF1L4Q8WU68 220 aaKnown RBP17.62■□□□□ 0.41
SSRP1-203ENST00000526696 PRUNE2Q8WUY3 3088 aa17.61■□□□□ 0.41
SSRP1-203ENST00000526696 BTBD19C9JJ37 291 aa17.61■□□□□ 0.41
SSRP1-203ENST00000526696 OSBPP22059 807 aa17.61■□□□□ 0.41
SSRP1-203ENST00000526696 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
SSRP1-203ENST00000526696 DBF4Q9UBU7 674 aaPredicted RBP17.61■□□□□ 0.41
SSRP1-203ENST00000526696 MYH3P11055 1940 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
SSRP1-203ENST00000526696 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
SSRP1-203ENST00000526696 BMP8BP34820 402 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 RIPK4P57078 832 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
SSRP1-203ENST00000526696 MYD88Q99836 296 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 UNC93B1Q9H1C4 597 aa17.6■□□□□ 0.41
SSRP1-203ENST00000526696 CHL1O00533 1208 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 PSMC4P43686 418 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 BCAMP50895 628 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSRP1-203ENST00000526696 GREM2Q9H772 168 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 CD209Q9NNX6 404 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 LEMD3Q9Y2U8 911 aa17.59■□□□□ 0.41
SSRP1-203ENST00000526696 LAMA2P24043 3122 aaKnown RBP17.59■□□□□ 0.41
SSRP1-203ENST00000526696 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 IRS2Q9Y4H2 1338 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 SGPL1O95470 568 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 CTSWP56202 376 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 MAP3K9P80192 1104 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 LRIT3Q3SXY7 679 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 RAET1EQ8TD07 263 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 CPA4Q9UI42 421 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 MUC3AQ02505 3323 aa17.58■□□□□ 0.4
SSRP1-203ENST00000526696 MYPNQ86TC9 1320 aa17.57■□□□□ 0.4
SSRP1-203ENST00000526696 MYO1BO43795 1136 aa17.57■□□□□ 0.4
SSRP1-203ENST00000526696 PHAXQ9H814 394 aaKnown RBP17.57■□□□□ 0.4
SSRP1-203ENST00000526696 ZCCHC17Q9NP64 241 aaKnown RBP17.57■□□□□ 0.4
SSRP1-203ENST00000526696 MGAMO43451 1857 aa17.56■□□□□ 0.4
SSRP1-203ENST00000526696 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
SSRP1-203ENST00000526696 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
SSRP1-203ENST00000526696 SPDYE5A6NIY4 337 aa17.56■□□□□ 0.4
SSRP1-203ENST00000526696 SNAP23O00161 211 aa17.56■□□□□ 0.4
SSRP1-203ENST00000526696 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
SSRP1-203ENST00000526696 IRF6O14896 467 aa17.55■□□□□ 0.4
SSRP1-203ENST00000526696 CETPP11597 493 aa17.55■□□□□ 0.4
SSRP1-203ENST00000526696 PRKCZQ05513 592 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms