RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 IQSEC3Q9UPP2 1182 aaPredicted RBP20.1■□□□□ 0.81
SSSCA1-202ENST00000526433 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-202ENST00000526433 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 TIMM10P62072 90 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 FKBP1AP62942 108 aaKnown RBP20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 KIF4BQ2VIQ3 1234 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 KIAA0825Q8IV33 1275 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 OGFOD1Q8N543 542 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 CERS5Q8N5B7 392 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
SSSCA1-202ENST00000526433 PASKQ96RG2 1323 aa20.08■□□□□ 0.81
SSSCA1-202ENST00000526433 MMP14P50281 582 aa20.08■□□□□ 0.81
SSSCA1-202ENST00000526433 AKAP2Q9Y2D5 859 aa20.08■□□□□ 0.81
SSSCA1-202ENST00000526433 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.81
SSSCA1-202ENST00000526433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.08■□□□□ 0.81
SSSCA1-202ENST00000526433 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
SSSCA1-202ENST00000526433 OS9Q13438 667 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-202ENST00000526433 RPAP2Q8IXW5 612 aaPredicted RBP20.07■□□□□ 0.8
SSSCA1-202ENST00000526433 HDAC9Q9UKV0 1011 aa20.07■□□□□ 0.8
SSSCA1-202ENST00000526433 ADORA1P30542 326 aa20.06■□□□□ 0.8
SSSCA1-202ENST00000526433 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
SSSCA1-202ENST00000526433 SCARF1Q14162 830 aa20.06■□□□□ 0.8
SSSCA1-202ENST00000526433 A0A1B0GUL7 405 aa20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 HTRA3P83110 453 aa20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 NEUROD6Q96NK8 337 aa20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 GNL3LQ9NVN8 582 aaKnown RBP20.05■□□□□ 0.8
SSSCA1-202ENST00000526433 PHKA1P46020 1223 aa20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 FMR1Q06787 632 aaKnown RBP eCLIP20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 CDC37L1Q7L3B6 337 aa20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 SIRT2Q8IXJ6 389 aa20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 XAGE2Q96GT9 111 aa20.04■□□□□ 0.8
SSSCA1-202ENST00000526433 ASTN2O75129 1339 aaPredicted RBP20.03■□□□□ 0.8
SSSCA1-202ENST00000526433 TRAF5O00463 557 aa20.03■□□□□ 0.8
SSSCA1-202ENST00000526433 NBPF9Q3BBW0 867 aa20.03■□□□□ 0.8
SSSCA1-202ENST00000526433 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
SSSCA1-202ENST00000526433 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
SSSCA1-202ENST00000526433 HMMRO75330 724 aa20.02■□□□□ 0.8
SSSCA1-202ENST00000526433 GPR108Q9NPR9 543 aa20.02■□□□□ 0.8
SSSCA1-202ENST00000526433 WNT10BO00744 389 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 DLGAP5Q15398 846 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 GRIK5Q16478 980 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 ANGEL2Q5VTE6 544 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 KRT26Q7Z3Y9 468 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 ZBED3Q96IU2 234 aaPredicted RBP20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 GGA3Q9NZ52 723 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 TTF2Q9UNY4 1162 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
SSSCA1-202ENST00000526433 TMEM88BA6NKF7 163 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 CFAP100Q494V2 611 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 TNNI3KQ59H18 835 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 GORABQ5T7V8 394 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 DLK2Q6UY11 383 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 DNAJC5GQ8N7S2 189 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 MTMR14Q8NCE2 650 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 WDR66Q8TBY9 1149 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 CREBZFQ9NS37 354 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 DENND2AQ9ULE3 1009 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
SSSCA1-202ENST00000526433 CEP350Q5VT06 3117 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 SEMA3EO15041 775 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 ZBTB22O15209 634 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 PCDHAC2Q9Y5I4 1007 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
SSSCA1-202ENST00000526433 ADM5C9JUS6 153 aa19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 RBM5P52756 815 aaKnown RBP eCLIP19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 CST9Q5W186 159 aa19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 ERC1Q8IUD2 1116 aa19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 PRMT6Q96LA8 375 aaPredicted RBP19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 ARAP2Q8WZ64 1704 aa19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 PITPNM2Q9BZ72 1349 aa19.98■□□□□ 0.79
SSSCA1-202ENST00000526433 SERPINA10Q9UK55 444 aa19.97■□□□□ 0.79
SSSCA1-202ENST00000526433 SCAF8Q9UPN6 1271 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-202ENST00000526433 SUGT1Q9Y2Z0 365 aa19.97■□□□□ 0.79
SSSCA1-202ENST00000526433 SPDYE2BA6NHP3 402 aa19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 CELF2O95319 508 aaKnown RBP19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 SPDYE6P0CI01 402 aa19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 RASGRF1Q13972 1273 aa19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 EAF2Q96CJ1 260 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 CRBNQ96SW2 442 aa19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 DBNDD2Q9BQY9 259 aa19.96■□□□□ 0.79
SSSCA1-202ENST00000526433 COL1A1P02452 1464 aaPredicted RBP19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 CRKP46108 304 aa19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 HDLBPQ00341 1268 aaKnown RBP19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 RHPN1Q8TCX5 695 aa19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 CCDC8Q9H0W5 538 aaPredicted RBP19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 ZNF408Q9H9D4 720 aa19.95■□□□□ 0.78
SSSCA1-202ENST00000526433 APBB1O00213 710 aa19.94■□□□□ 0.78
SSSCA1-202ENST00000526433 RAB11FIP3O75154 756 aa19.94■□□□□ 0.78
SSSCA1-202ENST00000526433 UQCRFS1P1P0C7P4 283 aa19.94■□□□□ 0.78
SSSCA1-202ENST00000526433 CCDC158Q5M9N0 1113 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms