RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 OSBPL1AQ9BXW6 950 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 SOX13Q9UN79 622 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 PDE2AO00408 941 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 ARL4DP49703 201 aa6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 ABTB2Q8N961 1025 aa6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 C1orf127Q8N9H9 656 aa6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 C12orf50Q8NA57 414 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 ZNF777Q9ULD5 760 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-219ENST00000526299 CES1P23141 567 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 ELOAQ14241 798 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 COL19A1Q14993 1142 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 NFKBIBQ15653 356 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 NUTM2GQ5VZR2 741 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 CBLL1Q75N03 491 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 ATCAYQ86WG3 371 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 TMPRSS13Q9BYE2 586 aa6.36□□□□□ -1.39
ECHDC1-219ENST00000526299 A6NHS1 94 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 SOX1O00570 391 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 PRNPP04156 253 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 C8AP07357 584 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 CDPF1Q6NVV7 123 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 SMG8Q8ND04 991 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 USP26Q9BXU7 913 aa6.35□□□□□ -1.39
ECHDC1-219ENST00000526299 LOC100289279A0A1B0GTE1 492 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 FAM95CA0A1B0GW59 222 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 TIAF1O95411 115 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 DLGAP3O95886 979 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 DRD2P14416 443 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 ADMP35318 185 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 VSIG10LQ86VR7 867 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 FBLIM1Q8WUP2 373 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 FBXL18Q96ME1 805 aa6.34□□□□□ -1.39
ECHDC1-219ENST00000526299 CYP26A1O43174 497 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 IKBKEQ14164 716 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 CPSF6Q16630 551 aaKnown RBP eCLIP6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 TMEM164Q5U3C3 297 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 VN1R5Q7Z5H4 357 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 POU5F2Q8N7G0 328 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 EDEM1Q92611 657 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 ASIC4Q96FT7 647 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 CHRDQ9H2X0 955 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 GGNBP2Q9H3C7 697 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 SUGCTQ9HAC7 445 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 CYP4F12Q9HCS2 524 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 SEPT3Q9UH03 358 aa6.33□□□□□ -1.4
ECHDC1-219ENST00000526299 ITGB5P18084 799 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 USP11P51784 963 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 DNM1Q05193 864 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 XKR5Q6UX68 686 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 OSMRQ99650 979 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
ECHDC1-219ENST00000526299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 FAM170BA6NMN3 283 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 C8orf34Q49A92 452 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 C2CD4AQ8NCU7 369 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 BSNDQ8WZ55 320 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 METTL22Q9BUU2 404 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 SLAIN2Q9P270 581 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
ECHDC1-219ENST00000526299 SRPK2P78362 688 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-219ENST00000526299 EXOSC6Q5RKV6 272 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-219ENST00000526299 FLCNQ8NFG4 579 aa6.3□□□□□ -1.4
ECHDC1-219ENST00000526299 CLP1Q92989 425 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-219ENST00000526299 EREGO14944 169 aa6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 PDGFAP04085 211 aa6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 RPLP1P05386 114 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 ASAP3Q8TDY4 903 aa6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 GATA6Q92908 595 aa6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 PAK6Q9NQU5 681 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-219ENST00000526299 ATG7O95352 703 aa6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 GSTM4Q03013 218 aa6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 SOX4Q06945 474 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 TMEM132AQ24JP5 1023 aa6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 PMEPA1Q969W9 287 aa6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 SOX17Q9H6I2 414 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-219ENST00000526299 PCSK2P16519 638 aa6.27□□□□□ -1.41
ECHDC1-219ENST00000526299 AGBL5Q8NDL9 886 aa6.27□□□□□ -1.41
ECHDC1-219ENST00000526299 LRRC4CQ9HCJ2 640 aa6.27□□□□□ -1.41
ECHDC1-219ENST00000526299 ZC3H7BQ9UGR2 993 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-219ENST00000526299 PAPLNO95428 1278 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 ATP2B4P23634 1241 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 NOM1Q5C9Z4 860 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 YIPF2Q9BWQ6 316 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 ACTL7BQ9Y614 415 aa6.26□□□□□ -1.41
ECHDC1-219ENST00000526299 METTL12A8MUP2 240 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms