RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 ZNF804AQ7Z570 1209 aa18.54■□□□□ 0.56
ROM1-202ENST00000525801 SLC10A4Q96EP9 437 aa18.54■□□□□ 0.56
ROM1-202ENST00000525801 C9orf78Q9NZ63 289 aaPredicted RBP18.54■□□□□ 0.56
ROM1-202ENST00000525801 ZNF609O15014 1411 aa18.54■□□□□ 0.56
ROM1-202ENST00000525801 PAPPA2Q9BXP8 1791 aa18.53■□□□□ 0.56
ROM1-202ENST00000525801 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
ROM1-202ENST00000525801 LDHAL6AQ6ZMR3 332 aa18.53■□□□□ 0.56
ROM1-202ENST00000525801 CLMNQ96JQ2 1002 aa18.53■□□□□ 0.56
ROM1-202ENST00000525801 GPR25O00155 361 aa18.52■□□□□ 0.56
ROM1-202ENST00000525801 SREBF2Q12772 1141 aa18.52■□□□□ 0.56
ROM1-202ENST00000525801 WDR63Q8IWG1 891 aa18.52■□□□□ 0.56
ROM1-202ENST00000525801 AOX1Q06278 1338 aa18.51■□□□□ 0.55
ROM1-202ENST00000525801 MYO1BO43795 1136 aa18.51■□□□□ 0.55
ROM1-202ENST00000525801 TM4SF4P48230 202 aa18.51■□□□□ 0.55
ROM1-202ENST00000525801 SPRYD7Q5W111 196 aa18.51■□□□□ 0.55
ROM1-202ENST00000525801 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
ROM1-202ENST00000525801 GYG1P46976 350 aa18.5■□□□□ 0.55
ROM1-202ENST00000525801 NBPF12Q5TAG4 269 aaPredicted RBP18.5■□□□□ 0.55
ROM1-202ENST00000525801 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
ROM1-202ENST00000525801 IQSEC3Q9UPP2 1182 aaPredicted RBP18.5■□□□□ 0.55
ROM1-202ENST00000525801 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
ROM1-202ENST00000525801 GRM8O00222 908 aa18.49■□□□□ 0.55
ROM1-202ENST00000525801 FKTNO75072 461 aa18.49■□□□□ 0.55
ROM1-202ENST00000525801 ZBED3Q96IU2 234 aaPredicted RBP18.49■□□□□ 0.55
ROM1-202ENST00000525801 PPP1R12BO60237 982 aaPredicted RBP18.48■□□□□ 0.55
ROM1-202ENST00000525801 CHAF1AQ13111 956 aaPredicted RBP18.48■□□□□ 0.55
ROM1-202ENST00000525801 LDLRAD1Q5T700 205 aa18.48■□□□□ 0.55
ROM1-202ENST00000525801 SUCLG2Q96I99 432 aa18.48■□□□□ 0.55
ROM1-202ENST00000525801 MYH3P11055 1940 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 PSME4Q14997 1843 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 SPDYE2BA6NHP3 402 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 SPDYE6P0CI01 402 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 IL1R1P14778 569 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 RASA3Q14644 834 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 TDRD3Q9H7E2 651 aaKnown RBP18.47■□□□□ 0.55
ROM1-202ENST00000525801 TTF2Q9UNY4 1162 aaKnown RBP18.47■□□□□ 0.55
ROM1-202ENST00000525801 IRS2Q9Y4H2 1338 aa18.47■□□□□ 0.55
ROM1-202ENST00000525801 TNRC18O15417 2968 aaPredicted RBP18.46■□□□□ 0.55
ROM1-202ENST00000525801 TCP10L2B9ZVM9 353 aa18.46■□□□□ 0.55
ROM1-202ENST00000525801 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
ROM1-202ENST00000525801 SUPT20HL1Q3ZLR7 823 aa18.46■□□□□ 0.55
ROM1-202ENST00000525801 MFSD14BQ5SR56 506 aa18.46■□□□□ 0.55
ROM1-202ENST00000525801 WNK4Q96J92 1243 aa18.46■□□□□ 0.55
ROM1-202ENST00000525801 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
ROM1-202ENST00000525801 SLC34A2O95436 690 aa18.45■□□□□ 0.54
ROM1-202ENST00000525801 HIBADHP31937 336 aaKnown RBP18.45■□□□□ 0.54
ROM1-202ENST00000525801 MMP14P50281 582 aa18.45■□□□□ 0.54
ROM1-202ENST00000525801 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
ROM1-202ENST00000525801 VPS37DQ86XT2 251 aa18.45■□□□□ 0.54
ROM1-202ENST00000525801 IFNL1Q8IU54 200 aa18.45■□□□□ 0.54
ROM1-202ENST00000525801 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
ROM1-202ENST00000525801 MANSC4A6NHS7 340 aaPredicted RBP18.44■□□□□ 0.54
ROM1-202ENST00000525801 IREB2P48200 963 aaKnown RBP18.44■□□□□ 0.54
ROM1-202ENST00000525801 C15orf52Q6ZUT6 534 aaKnown RBP18.44■□□□□ 0.54
ROM1-202ENST00000525801 ZNF70Q9UC06 446 aaPredicted RBP18.44■□□□□ 0.54
ROM1-202ENST00000525801 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
ROM1-202ENST00000525801 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
ROM1-202ENST00000525801 USP2O75604 605 aaPredicted RBP18.43■□□□□ 0.54
ROM1-202ENST00000525801 ECM2O94769 699 aaPredicted RBP18.43■□□□□ 0.54
ROM1-202ENST00000525801 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
ROM1-202ENST00000525801 GRIK5Q16478 980 aa18.43■□□□□ 0.54
ROM1-202ENST00000525801 FBXO46Q6PJ61 603 aaPredicted RBP18.43■□□□□ 0.54
ROM1-202ENST00000525801 CDAN1Q8IWY9 1227 aa18.43■□□□□ 0.54
ROM1-202ENST00000525801 MTMR14Q8NCE2 650 aa18.43■□□□□ 0.54
ROM1-202ENST00000525801 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 GJA5P36382 358 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 CACNB3P54284 484 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 LRRC24Q50LG9 513 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 CD99L2Q8TCZ2 262 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
ROM1-202ENST00000525801 FAM84BQ96KN1 310 aaPredicted RBP18.42■□□□□ 0.54
ROM1-202ENST00000525801 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
ROM1-202ENST00000525801 ALDH1A1P00352 501 aa18.41■□□□□ 0.54
ROM1-202ENST00000525801 TDRD7Q8NHU6 1098 aaKnown RBP18.41■□□□□ 0.54
ROM1-202ENST00000525801 TMEM39BQ9GZU3 492 aa18.41■□□□□ 0.54
ROM1-202ENST00000525801 PPP2R3BQ9Y5P8 575 aa18.41■□□□□ 0.54
ROM1-202ENST00000525801 SSC5DA1L4H1 1573 aa18.41■□□□□ 0.54
ROM1-202ENST00000525801 CRKP46108 304 aa18.4■□□□□ 0.54
ROM1-202ENST00000525801 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
ROM1-202ENST00000525801 DZIP1LQ8IYY4 767 aaKnown RBP18.4■□□□□ 0.54
ROM1-202ENST00000525801 OPTNQ96CV9 577 aa18.4■□□□□ 0.54
ROM1-202ENST00000525801 KAZALD1Q96I82 304 aa18.4■□□□□ 0.54
ROM1-202ENST00000525801 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
ROM1-202ENST00000525801 INHBEP58166 350 aa18.39■□□□□ 0.53
ROM1-202ENST00000525801 FKBP1AP62942 108 aaKnown RBP18.39■□□□□ 0.53
ROM1-202ENST00000525801 CRHR2Q13324 411 aa18.39■□□□□ 0.53
ROM1-202ENST00000525801 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
ROM1-202ENST00000525801 ANKRD13AQ8IZ07 590 aa18.39■□□□□ 0.53
ROM1-202ENST00000525801 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
ROM1-202ENST00000525801 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.53
ROM1-202ENST00000525801 MYCP01106 439 aaPredicted RBP18.38■□□□□ 0.53
ROM1-202ENST00000525801 TNFAIP1Q13829 316 aa18.38■□□□□ 0.53
ROM1-202ENST00000525801 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
ROM1-202ENST00000525801 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
ROM1-202ENST00000525801 OTUD7BQ6GQQ9 843 aa18.38■□□□□ 0.53
ROM1-202ENST00000525801 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
ROM1-202ENST00000525801 COL1A1P02452 1464 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms