RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SLC35F4A4IF30 521 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 BRD1O95696 1058 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 CTSOP43234 321 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-203ENST00000524927 USP4Q13107 963 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 PTK7Q13308 1070 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
NEDD8-203ENST00000524927 TMEM164Q5U3C3 297 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 ZNF385CQ66K41 422 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-203ENST00000524927 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 ABTB2Q8N961 1025 aa10.38□□□□□ -0.75
NEDD8-203ENST00000524927 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-203ENST00000524927 GLTPD2A6NH11 291 aa10.37□□□□□ -0.75
NEDD8-203ENST00000524927 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
NEDD8-203ENST00000524927 NANOS1Q8WY41 292 aaKnown RBP10.37□□□□□ -0.75
NEDD8-203ENST00000524927 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-203ENST00000524927 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
NEDD8-203ENST00000524927 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
NEDD8-203ENST00000524927 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
NEDD8-203ENST00000524927 GTF2IP78347 998 aa10.36□□□□□ -0.75
NEDD8-203ENST00000524927 RASSF7Q02833 373 aa10.36□□□□□ -0.75
NEDD8-203ENST00000524927 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
NEDD8-203ENST00000524927 LY75O60449 1722 aa10.36□□□□□ -0.75
NEDD8-203ENST00000524927 QRICH2Q9H0J4 1663 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 PPIP5K1Q6PFW1 1433 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 CLDN10P78369 228 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 DPYDQ12882 1025 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 VWA5B2Q8N398 1253 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 LARGE2Q8N3Y3 721 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 POGKQ9P215 609 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 KIAA1551Q9HCM1 1747 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
NEDD8-203ENST00000524927 PIK3C2GO75747 1445 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 A0A0C4DFX4 3053 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 A0A0G2JLW4 131 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 MYCP01106 439 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-203ENST00000524927 FXR1P51114 621 aaKnown RBP eCLIP10.34□□□□□ -0.75
NEDD8-203ENST00000524927 KCNA1Q09470 495 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
NEDD8-203ENST00000524927 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 INSM2Q96T92 566 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-203ENST00000524927 USP54Q70EL1 1684 aa10.34□□□□□ -0.75
NEDD8-203ENST00000524927 PASKQ96RG2 1323 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 RASSF10A6NK89 507 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 ERVH48-1M5A8F1 160 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 WASLO00401 505 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-203ENST00000524927 GDF11O95390 407 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 SOX10P56693 466 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 RELBQ01201 579 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 TMPRSS4Q9NRS4 437 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-203ENST00000524927 ROCK1Q13464 1354 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 ARFGEF1Q9Y6D6 1849 aa10.33□□□□□ -0.76
NEDD8-203ENST00000524927 DGKZQ13574 1117 aa10.32□□□□□ -0.76
NEDD8-203ENST00000524927 TMEM151AQ8N4L1 468 aa10.32□□□□□ -0.76
NEDD8-203ENST00000524927 DCAF5Q96JK2 942 aa10.32□□□□□ -0.76
NEDD8-203ENST00000524927 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-203ENST00000524927 ZNF395Q9H8N7 513 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-203ENST00000524927 PGPEP1Q9NXJ5 209 aa10.32□□□□□ -0.76
NEDD8-203ENST00000524927 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
NEDD8-203ENST00000524927 WDR33Q9C0J8 1336 aaKnown RBP10.32□□□□□ -0.76
NEDD8-203ENST00000524927 ZBTB7BO15156 539 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-203ENST00000524927 ARHGEF15O94989 841 aa10.31□□□□□ -0.76
NEDD8-203ENST00000524927 DEFB115Q30KQ5 88 aa10.31□□□□□ -0.76
NEDD8-203ENST00000524927 CCDC102BQ68D86 513 aa10.31□□□□□ -0.76
NEDD8-203ENST00000524927 KDF1Q8NAX2 398 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-203ENST00000524927 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
NEDD8-203ENST00000524927 KIAA1024Q9UPX6 916 aa10.31□□□□□ -0.76
NEDD8-203ENST00000524927 N4BP2Q86UW6 1770 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-203ENST00000524927 DPEP1P16444 411 aa10.3□□□□□ -0.76
NEDD8-203ENST00000524927 ITGA6P23229 1130 aa10.3□□□□□ -0.76
NEDD8-203ENST00000524927 ADD1P35611 737 aaKnown RBP10.3□□□□□ -0.76
NEDD8-203ENST00000524927 DHX9Q08211 1270 aaKnown RBP10.3□□□□□ -0.76
NEDD8-203ENST00000524927 C14orf93Q9H972 538 aaKnown RBP10.3□□□□□ -0.76
NEDD8-203ENST00000524927 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
NEDD8-203ENST00000524927 KDM6AO15550 1401 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-203ENST00000524927 SBF1O95248 1867 aa10.3□□□□□ -0.76
NEDD8-203ENST00000524927 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
NEDD8-203ENST00000524927 SLURP2P0DP57 97 aa10.29□□□□□ -0.76
NEDD8-203ENST00000524927 SEC13P55735 322 aa10.29□□□□□ -0.76
NEDD8-203ENST00000524927 SIX5Q8N196 739 aa10.29□□□□□ -0.76
NEDD8-203ENST00000524927 ACEP12821 1306 aa10.29□□□□□ -0.76
NEDD8-203ENST00000524927 ANKRD36BQ8N2N9 1353 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 NSD3Q9BZ95 1437 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 CDC14CA4D256 554 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 CA12O43570 354 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 IL2RBP14784 551 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 RNF217Q8TC41 542 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 NUDT16Q96DE0 195 aaKnown RBP10.28□□□□□ -0.76
NEDD8-203ENST00000524927 CUEDC1Q9NWM3 386 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-203ENST00000524927 PIM2Q9P1W9 311 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 SLIT3O75094 1523 aa10.28□□□□□ -0.76
NEDD8-203ENST00000524927 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
NEDD8-203ENST00000524927 THSD7BQ9C0I4 1608 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 SFI1A8K8P3 1242 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 SCTRP47872 440 aa10.27□□□□□ -0.77
NEDD8-203ENST00000524927 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms