RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 ECM2O94769 699 aaPredicted RBP19.66■□□□□ 0.74
BEST1-203ENST00000524877 CCDC150Q8NCX0 1101 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 PIGBQ92521 554 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 TEKT1Q969V4 418 aa19.66■□□□□ 0.74
BEST1-203ENST00000524877 ZMYM4Q5VZL5 1548 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 SULF1Q8IWU6 871 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 NAPAP54920 295 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 GUCY1B3Q02153 619 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 DHX8Q14562 1220 aaKnown RBP19.65■□□□□ 0.74
BEST1-203ENST00000524877 SPATA5Q8NB90 893 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 LAMC1P11047 1609 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 IVNS1ABPQ9Y6Y0 642 aa19.65■□□□□ 0.74
BEST1-203ENST00000524877 SDSP20132 328 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 CCDC93Q567U6 631 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 STXBP4Q6ZWJ1 553 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 DCTPP1Q9H773 170 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.74
BEST1-203ENST00000524877 LIG1P18858 919 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 TSPY26PQ9H489 355 aa19.64■□□□□ 0.74
BEST1-203ENST00000524877 RBM8AQ9Y5S9 174 aaKnown RBP19.64■□□□□ 0.74
BEST1-203ENST00000524877 AS3MTQ9HBK9 375 aa19.64■□□□□ 0.73
BEST1-203ENST00000524877 SPDYE3A6NKU9 549 aa19.64■□□□□ 0.73
BEST1-203ENST00000524877 C6orf50Q9HD87 102 aa19.64■□□□□ 0.73
BEST1-203ENST00000524877 TIMM10P62072 90 aa19.64■□□□□ 0.73
BEST1-203ENST00000524877 CDK12Q9NYV4 1490 aaPredicted RBP19.64■□□□□ 0.73
BEST1-203ENST00000524877 CCDC171Q6TFL3 1326 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 PPRC1Q5VV67 1664 aaKnown RBP19.63■□□□□ 0.73
BEST1-203ENST00000524877 SERPINC1P01008 464 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 RAD50Q92878 1312 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 RAB11FIP4Q86YS3 637 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 LUC7LQ9NQ29 371 aaKnown RBP19.63■□□□□ 0.73
BEST1-203ENST00000524877 TTF2Q9UNY4 1162 aaKnown RBP19.63■□□□□ 0.73
BEST1-203ENST00000524877 KIF22Q14807 665 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 DCAF15Q66K64 600 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 LEKR1Q6ZMV7 388 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 XDHP47989 1333 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 PARP1P09874 1014 aaKnown RBP19.63■□□□□ 0.73
BEST1-203ENST00000524877 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
BEST1-203ENST00000524877 AMPD3Q01432 767 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 LRRC27Q9C0I9 530 aa19.63■□□□□ 0.73
BEST1-203ENST00000524877 POTEJP0CG39 1038 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 CAVIN1Q6NZI2 390 aaKnown RBP19.62■□□□□ 0.73
BEST1-203ENST00000524877 GOPCQ9HD26 462 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 PYM1Q9BRP8 204 aaKnown RBP19.62■□□□□ 0.73
BEST1-203ENST00000524877 SSFA2P28290 1259 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 MFSD14BQ5SR56 506 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 TXLNBQ8N3L3 684 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 IGHDP01880 384 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 KCNQ4P56696 695 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 ACBD3Q9H3P7 528 aa19.62■□□□□ 0.73
BEST1-203ENST00000524877 AATFQ9NY61 560 aaKnown RBP eCLIP19.62■□□□□ 0.73
BEST1-203ENST00000524877 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 PRC1O43663 620 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 RPS6KA4O75676 772 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 ERVV-1B6SEH8 477 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 BBOX1O75936 387 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 ZNF526Q8TF50 670 aaPredicted RBP19.61■□□□□ 0.73
BEST1-203ENST00000524877 NPR1P16066 1061 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 USP40Q9NVE5 1235 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 E9PCH4 1651 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 RTKN2Q8IZC4 609 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 ESYT1Q9BSJ8 1104 aa19.61■□□□□ 0.73
BEST1-203ENST00000524877 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
BEST1-203ENST00000524877 TRIM5Q9C035 493 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 ZHX1Q9UKY1 873 aaPredicted RBP19.6■□□□□ 0.73
BEST1-203ENST00000524877 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
BEST1-203ENST00000524877 GIGYF2Q6Y7W6 1299 aaKnown RBP19.6■□□□□ 0.73
BEST1-203ENST00000524877 RBM28Q9NW13 759 aaKnown RBP19.6■□□□□ 0.73
BEST1-203ENST00000524877 PIM2Q9P1W9 311 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 PIK3C2BO00750 1634 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 CBFA2T2O43439 604 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 TCP10Q12799 353 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 PPFIBP1Q86W92 1011 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 GPATCH11Q8N954 259 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 KLHDC4Q8TBB5 520 aa19.6■□□□□ 0.73
BEST1-203ENST00000524877 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
BEST1-203ENST00000524877 FERMT3Q86UX7 667 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 ZBED4O75132 1171 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 BRDTQ58F21 947 aaPredicted RBP19.59■□□□□ 0.73
BEST1-203ENST00000524877 BRF1Q92994 677 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 LEMD3Q9Y2U8 911 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
BEST1-203ENST00000524877 DBNDD2Q9BQY9 259 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.59■□□□□ 0.73
BEST1-203ENST00000524877 ZBTB40Q9NUA8 1239 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 MMP10P09238 476 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 ADRA2BP18089 450 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 ERFEQ4G0M1 354 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 GIMAP7Q8NHV1 300 aa19.59■□□□□ 0.73
BEST1-203ENST00000524877 FGFR1OPO95684 399 aaKnown RBP19.59■□□□□ 0.73
BEST1-203ENST00000524877 SEPT11Q9NVA2 429 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms