RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, human

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE2-208	ENST00000524317	ZAP70	P43403	619 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	TOB2	Q14106	344 aa	Predicted RBP	13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	NECAB1	Q8N987	351 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	IVNS1ABP	Q9Y6Y0	642 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	HSPD1	P10809	573 aa	Known RBP	13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	SYT1	P21579	422 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	KCNA1	Q09470	495 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	PI16	Q6UXB8	463 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	OSBP2	Q969R2	916 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317	PSMD1	Q99460	953 aa		13.85	□□□□□ -0.19
SCUBE2-208	ENST00000524317		M0R2C6	588 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	STX6	O43752	255 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	GJB2	P29033	226 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	LINC00116	Q8NCU8	138 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	ISY1	Q9ULR0	285 aa	Known RBP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	PPP1R37	O75864	691 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	NTSR2	O95665	410 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	MCAM	P43121	646 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	TERF1	P54274	439 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	GPT2	Q8TD30	523 aa		13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	ZNF526	Q8TF50	670 aa	Predicted RBP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	TRIM44	Q96DX7	344 aa	Predicted RBP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.84	□□□□□ -0.19
SCUBE2-208	ENST00000524317	MROH5	Q6ZUA9	1318 aa		13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ZFY	P08048	801 aa	Predicted RBP	13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ZSCAN22	P10073	491 aa	Predicted RBP	13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	GTF2E1	P29083	439 aa	Predicted RBP	13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	STOX1	Q6ZVD7	989 aa		13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	GAS2L3	Q86XJ1	694 aa		13.83	□□□□□ -0.2
SCUBE2-208	ENST00000524317	DTNB	O60941	627 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PUM3	Q15397	648 aa	Known RBP	13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SEC31B	Q9NQW1	1179 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	FGFR2	P21802	821 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CAVIN1	Q6NZI2	390 aa	Known RBP	13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PTF1A	Q7RTS3	328 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	LPIN2	Q92539	896 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SPATA32	Q96LK8	384 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ZNF652	Q9Y2D9	606 aa		13.82	□□□□□ -0.2
SCUBE2-208	ENST00000524317	KCNQ4	P56696	695 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	WASHC4	Q2M389	1173 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CCDC152	Q4G0S7	254 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CCDC102B	Q68D86	513 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	MTERF4	Q7Z6M4	381 aa	Known RBP	13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	HELB	Q8NG08	1087 aa	Predicted RBP	13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	RREB1	Q92766	1687 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	LRP5	O75197	1615 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CIC	Q96RK0	1608 aa	Predicted RBP	13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317		A0A0G2JLW4	131 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	GPR37	O15354	613 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	FOXP2	O15409	715 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	UTP14C	Q5TAP6	766 aa	Known RBP	13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CLEC4G	Q6UXB4	293 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	APPBP2	Q92624	585 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	MPHOSPH8	Q99549	860 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	GRPEL1	Q9HAV7	217 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	USP21	Q9UK80	565 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ANKRD36C	Q5JPF3	1778 aa		13.81	□□□□□ -0.2
SCUBE2-208	ENST00000524317	F13A1	P00488	732 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PHKA1	P46020	1223 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317		Q6ZUG5	572 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PUS7L	Q9H0K6	701 aa	Known RBP	13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	MTMR6	Q9Y217	621 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	KAT6B	Q8WYB5	2073 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SPEF2	Q9C093	1822 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SPATA31A6	Q5VVP1	1343 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ARID4A	P29374	1257 aa	Predicted RBP	13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ZSCAN23	Q3MJ62	389 aa		13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.8	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CNTNAP4	Q9C0A0	1308 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	STK3	Q13188	491 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	CC2D2B	Q6DHV5	1058 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	TTLL5	Q6EMB2	1281 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	DHX32	Q7L7V1	743 aa	Known RBP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	GDPD2	Q9HCC8	539 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	RTL9	Q8NET4	1388 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	NUP98	P52948	1817 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317		E7EWF7	191 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SNAP23	O00161	211 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	MBD3	O95983	291 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	UQCRFS1P1	P0C7P4	283 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ZNF445	P59923	1031 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	TTF1	Q15361	905 aa	Predicted RBP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	IPO4	Q8TEX9	1081 aa	Known RBP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	LRRC2	Q9BYS8	371 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PRDM16	Q9HAZ2	1276 aa		13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	PIH1D3	Q9NQM4	214 aa	Known RBP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	RBM27	Q9P2N5	1060 aa	Known RBP	13.79	□□□□□ -0.2
SCUBE2-208	ENST00000524317	SLC5A1	P13866	664 aa		13.78	□□□□□ -0.2
SCUBE2-208	ENST00000524317	ADD2	P35612	726 aa		13.78	□□□□□ -0.2
SCUBE2-208	ENST00000524317	IGHMBP2	P38935	993 aa	Known RBP	13.78	□□□□□ -0.2
SCUBE2-208	ENST00000524317	EXOSC10	Q01780	885 aa	Known RBP	13.78	□□□□□ -0.2
SCUBE2-208	ENST00000524317	USP48	Q86UV5	1035 aa		13.78	□□□□□ -0.2
SCUBE2-208	ENST00000524317	TMEM87A	Q8NBN3	555 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms