RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 CCDC180Q9P1Z9 1646 aa8.25□□□□□ -1.09
SREK1-213ENST00000523655 SPRED3Q2MJR0 410 aa8.24□□□□□ -1.09
SREK1-213ENST00000523655 A0A1W2PP55 124 aa8.23□□□□□ -1.09
SREK1-213ENST00000523655 DLGAP3O95886 979 aa8.23□□□□□ -1.09
SREK1-213ENST00000523655 FSTP19883 344 aa8.23□□□□□ -1.09
SREK1-213ENST00000523655 IKBKEQ14164 716 aa8.23□□□□□ -1.09
SREK1-213ENST00000523655 B4GALNT3Q6L9W6 998 aa8.23□□□□□ -1.09
SREK1-213ENST00000523655 RANGAP1P46060 587 aaPredicted RBP8.22□□□□□ -1.09
SREK1-213ENST00000523655 GRIA4P48058 902 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 PREPP48147 710 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 C19orf57Q0VDD7 668 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 TRIM26Q12899 539 aaPredicted RBP8.22□□□□□ -1.09
SREK1-213ENST00000523655 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
SREK1-213ENST00000523655 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
SREK1-213ENST00000523655 HYAL3O43820 417 aaPredicted RBP8.21□□□□□ -1.1
SREK1-213ENST00000523655 ESRRAP11474 423 aaPredicted RBP8.21□□□□□ -1.1
SREK1-213ENST00000523655 GALNT12Q8IXK2 581 aa8.21□□□□□ -1.1
SREK1-213ENST00000523655 DCAF11Q8TEB1 546 aa8.21□□□□□ -1.1
SREK1-213ENST00000523655 FAM46AQ96IP4 442 aaKnown RBP8.21□□□□□ -1.1
SREK1-213ENST00000523655 TCF12Q99081 682 aa8.21□□□□□ -1.1
SREK1-213ENST00000523655 RUSC1Q9BVN2 902 aa8.21□□□□□ -1.1
SREK1-213ENST00000523655 NIF3L1Q9GZT8 377 aa8.21□□□□□ -1.1
SREK1-213ENST00000523655 HMX2A2RU54 273 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 GPR182O15218 404 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 TRIM42Q8IWZ5 723 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 WNT8BQ93098 351 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
SREK1-213ENST00000523655 ZFP64Q9NPA5 681 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 CC2D2AQ9P2K1 1620 aa8.2□□□□□ -1.1
SREK1-213ENST00000523655 NDUFB5O43674 189 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 IGHA2P01877 340 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 GSTM4Q03013 218 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 ZNF423Q2M1K9 1284 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 STOML1Q9UBI4 398 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 CUX2O14529 1486 aa8.19□□□□□ -1.1
SREK1-213ENST00000523655 A0A096LPE4 126 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 LOC100289279A0A1B0GTE1 492 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 DHX15O43143 795 aaKnown RBP8.18□□□□□ -1.1
SREK1-213ENST00000523655 CTSBP07858 339 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 ARL4DP49703 201 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
SREK1-213ENST00000523655 BMP3P12645 472 aa8.17□□□□□ -1.1
SREK1-213ENST00000523655 DRD2P14416 443 aa8.17□□□□□ -1.1
SREK1-213ENST00000523655 SSTR4P31391 388 aa8.17□□□□□ -1.1
SREK1-213ENST00000523655 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
SREK1-213ENST00000523655 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
SREK1-213ENST00000523655 SOWAHDA6NJG2 315 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
SREK1-213ENST00000523655 MED26O95402 600 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 ECEL1O95672 775 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 LRP8Q14114 963 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 KCNF1Q9H3M0 494 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 RNF112Q9ULX5 631 aa8.16□□□□□ -1.1
SREK1-213ENST00000523655 EIF1AYO14602 144 aaKnown RBP8.15□□□□□ -1.1
SREK1-213ENST00000523655 CPNE3O75131 537 aaKnown RBP8.15□□□□□ -1.1
SREK1-213ENST00000523655 TGFB1P01137 390 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 IGLV1-40P01703 118 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 SHISA5Q8N114 240 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 C12orf50Q8NA57 414 aaPredicted RBP8.15□□□□□ -1.1
SREK1-213ENST00000523655 EHD4Q9H223 541 aa8.15□□□□□ -1.1
SREK1-213ENST00000523655 KIAA0319Q5VV43 1072 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 PI16Q6UXB8 463 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
SREK1-213ENST00000523655 EPS8L3Q8TE67 593 aaKnown RBP8.14□□□□□ -1.11
SREK1-213ENST00000523655 CCDC74AQ96AQ1 378 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 NRSN2Q9GZP1 204 aa8.14□□□□□ -1.11
SREK1-213ENST00000523655 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
SREK1-213ENST00000523655 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
SREK1-213ENST00000523655 PDE3BQ13370 1112 aa8.13□□□□□ -1.11
SREK1-213ENST00000523655 NUTM2GQ5VZR2 741 aa8.13□□□□□ -1.11
SREK1-213ENST00000523655 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
SREK1-213ENST00000523655 CLEC4MQ9H2X3 399 aaPredicted RBP8.13□□□□□ -1.11
SREK1-213ENST00000523655 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
SREK1-213ENST00000523655 MAOBP27338 520 aa8.12□□□□□ -1.11
SREK1-213ENST00000523655 NFIAQ12857 509 aa8.12□□□□□ -1.11
SREK1-213ENST00000523655 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
SREK1-213ENST00000523655 ZDHHC13Q8IUH4 622 aa8.12□□□□□ -1.11
SREK1-213ENST00000523655 TRIM56Q9BRZ2 755 aaKnown RBP8.12□□□□□ -1.11
SREK1-213ENST00000523655 SOX17Q9H6I2 414 aaPredicted RBP8.12□□□□□ -1.11
SREK1-213ENST00000523655 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
SREK1-213ENST00000523655 GADD45BO75293 160 aaPredicted RBP8.11□□□□□ -1.11
SREK1-213ENST00000523655 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
SREK1-213ENST00000523655 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms