RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 PNMA6FA0A0J9YX94 578 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
PCM1-219ENST00000523540 FBXO33Q7Z6M2 555 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 WFDC8Q8IUA0 241 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
PCM1-219ENST00000523540 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
PCM1-219ENST00000523540 NFKBIEO00221 500 aa8.12□□□□□ -1.11
PCM1-219ENST00000523540 PEAR1Q5VY43 1037 aaPredicted RBP8.12□□□□□ -1.11
PCM1-219ENST00000523540 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
PCM1-219ENST00000523540 WNT8BQ93098 351 aa8.12□□□□□ -1.11
PCM1-219ENST00000523540 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
PCM1-219ENST00000523540 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
PCM1-219ENST00000523540 WWC3Q9ULE0 1092 aa8.12□□□□□ -1.11
PCM1-219ENST00000523540 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
PCM1-219ENST00000523540 ACPPP15309 386 aa8.11□□□□□ -1.11
PCM1-219ENST00000523540 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
PCM1-219ENST00000523540 FBF1Q8TES7 1133 aa8.11□□□□□ -1.11
PCM1-219ENST00000523540 LATS2Q9NRM7 1088 aa8.11□□□□□ -1.11
PCM1-219ENST00000523540 PTPRAP18433 802 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 ATP11AP98196 1134 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 KIAA0319Q5VV43 1072 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 NPHS2Q9NP85 383 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 PCMTD2Q9NV79 361 aa8.1□□□□□ -1.11
PCM1-219ENST00000523540 DLL1O00548 723 aa8.09□□□□□ -1.11
PCM1-219ENST00000523540 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
PCM1-219ENST00000523540 CD97P48960 835 aa8.09□□□□□ -1.11
PCM1-219ENST00000523540 FGD1P98174 961 aa8.09□□□□□ -1.11
PCM1-219ENST00000523540 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
PCM1-219ENST00000523540 ALG1LQ6GMV1 187 aa8.09□□□□□ -1.11
PCM1-219ENST00000523540 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
PCM1-219ENST00000523540 ZKSCAN3Q9BRR0 538 aa8.09□□□□□ -1.11
PCM1-219ENST00000523540 A0A1W2PP55 124 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
PCM1-219ENST00000523540 PAX4O43316 350 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 TRPA1O75762 1119 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 FSTP19883 344 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
PCM1-219ENST00000523540 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
PCM1-219ENST00000523540 OSMRQ99650 979 aa8.08□□□□□ -1.12
PCM1-219ENST00000523540 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 PRPF40AO75400 957 aaKnown RBP8.07□□□□□ -1.12
PCM1-219ENST00000523540 CDC27P30260 824 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 ATP2B2Q01814 1243 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 PI16Q6UXB8 463 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 NXPE3Q969Y0 559 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 HHIPQ96QV1 700 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 POP1Q99575 1024 aaKnown RBP8.07□□□□□ -1.12
PCM1-219ENST00000523540 BCL2L13Q9BXK5 485 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 SOX17Q9H6I2 414 aaPredicted RBP8.07□□□□□ -1.12
PCM1-219ENST00000523540 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 PPME1Q9Y570 386 aa8.07□□□□□ -1.12
PCM1-219ENST00000523540 H3BRJ5 948 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.06□□□□□ -1.12
PCM1-219ENST00000523540 ADAMTSL4Q6UY14 1074 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 Q6ZS46 218 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 CCNJLQ8IV13 435 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 IL22RA1Q8N6P7 574 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 KLHL23Q8NBE8 558 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 BSNDQ8WZ55 320 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 OSGEPQ9NPF4 335 aa8.06□□□□□ -1.12
PCM1-219ENST00000523540 TXKP42681 527 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 CABP4P57796 275 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 PIP4K2BP78356 416 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 TCF12Q99081 682 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 DUSP9Q99956 384 aaKnown RBP8.05□□□□□ -1.12
PCM1-219ENST00000523540 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 RNF19AQ9NV58 838 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
PCM1-219ENST00000523540 RBM47A0AV96 593 aaKnown RBP8.04□□□□□ -1.12
PCM1-219ENST00000523540 KIAA1324LA8MWY0 1029 aaPredicted RBP8.04□□□□□ -1.12
PCM1-219ENST00000523540 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
PCM1-219ENST00000523540 SSTR4P31391 388 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 GRM2Q14416 872 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 GDF6Q6KF10 455 aaPredicted RBP8.04□□□□□ -1.12
PCM1-219ENST00000523540 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 GLIS3Q8NEA6 775 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 GIPC2Q8TF65 315 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 FOXD4L4Q8WXT5 416 aaPredicted RBP8.04□□□□□ -1.12
PCM1-219ENST00000523540 SRCIN1Q9C0H9 1055 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 LIN7BQ9HAP6 207 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 ZFYVE1Q9HBF4 777 aa8.04□□□□□ -1.12
PCM1-219ENST00000523540 TM4SF5O14894 197 aa8.03□□□□□ -1.12
PCM1-219ENST00000523540 GIPC1O14908 333 aa8.03□□□□□ -1.12
PCM1-219ENST00000523540 GADD45BO75293 160 aaPredicted RBP8.03□□□□□ -1.12
PCM1-219ENST00000523540 ZNF16P17020 682 aaPredicted RBP8.03□□□□□ -1.12
PCM1-219ENST00000523540 ITPKAP23677 461 aa8.03□□□□□ -1.12
PCM1-219ENST00000523540 FRMD6Q96NE9 622 aa8.03□□□□□ -1.12
PCM1-219ENST00000523540 MRPL18Q9H0U6 180 aaKnown RBP8.03□□□□□ -1.12
PCM1-219ENST00000523540 EHD4Q9H223 541 aa8.03□□□□□ -1.12
PCM1-219ENST00000523540 ALX3O95076 343 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 MED26O95402 600 aa8.02□□□□□ -1.13
PCM1-219ENST00000523540 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms