RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 CNNM1Q9NRU3 951 aa7.9□□□□□ -1.14
SHPRH-210ENST00000523276 LRP5O75197 1615 aa7.9□□□□□ -1.14
SHPRH-210ENST00000523276 PHLPP1O60346 1717 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 ANKRD36CQ5JPF3 1778 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 SLIT2O94813 1529 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 DTNBO60941 627 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 ZAP70P43403 619 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 CRKLP46109 303 aaKnown RBP7.9□□□□□ -1.15
SHPRH-210ENST00000523276 CCDC173Q0VFZ6 552 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 CSPP1Q1MSJ5 1256 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 DHX32Q7L7V1 743 aaKnown RBP7.9□□□□□ -1.15
SHPRH-210ENST00000523276 ACSBG1Q96GR2 724 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.15
SHPRH-210ENST00000523276 PPP1R9BQ96SB3 815 aa7.9□□□□□ -1.15
SHPRH-210ENST00000523276 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 E7EWF7 191 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 PHF14O94880 888 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 SIK1P57059 783 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 UBE2HP62256 183 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 EXOSC10Q01780 885 aaKnown RBP7.89□□□□□ -1.15
SHPRH-210ENST00000523276 STK3Q13188 491 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 E2F4Q16254 413 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 APPBP2Q92624 585 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
SHPRH-210ENST00000523276 CICQ96RK0 1608 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 RREB1Q92766 1687 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 NUTM2BA6NNL0 878 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 NUTM2EB1AL46 878 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 FOXP2O15409 715 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 FIBPO43427 364 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 PFKFB2O60825 505 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 CAMTA2O94983 1202 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 PDE8BO95263 885 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 HSP90B1P14625 803 aaKnown RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 MCAMP43121 646 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 ITPK1Q13572 414 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 SUSD4Q5VX71 490 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 PI16Q6UXB8 463 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 CDC37L1Q7L3B6 337 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 NUTM2AQ8IVF1 878 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 BRF1Q92994 677 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 RRAGDQ9NQL2 400 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 A0A0G2JLW4 131 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 A0A0G2JS52 829 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 JAK2O60674 1132 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 TIE1P35590 1138 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 FGD1P98174 961 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 PARP10Q53GL7 1025 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 SMARCC1Q92922 1105 aaPredicted RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 LLPHQ9BRT6 129 aaKnown RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 UTP14AQ9BVJ6 771 aaKnown RBP7.88□□□□□ -1.15
SHPRH-210ENST00000523276 LRRC2Q9BYS8 371 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 CTNNA3Q9UI47 895 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 MROH5Q6ZUA9 1318 aa7.88□□□□□ -1.15
SHPRH-210ENST00000523276 TTLL13PA6NNM8 815 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 HCLS1P14317 486 aaPredicted RBP7.87□□□□□ -1.15
SHPRH-210ENST00000523276 FGFR2P21802 821 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 ARID4AP29374 1257 aaPredicted RBP7.87□□□□□ -1.15
SHPRH-210ENST00000523276 SCRN1Q12765 414 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 TTF1Q15361 905 aaPredicted RBP7.87□□□□□ -1.15
SHPRH-210ENST00000523276 PUM3Q15397 648 aaKnown RBP7.87□□□□□ -1.15
SHPRH-210ENST00000523276 TTLL5Q6EMB2 1281 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 ZSCAN25Q6NSZ9 544 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 FBXL16Q8N461 479 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 SMARCC2Q8TAQ2 1214 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 LPIN2Q92539 896 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.155e-7■■■■□ 19.8
SHPRH-210ENST00000523276 PUS7LQ9H0K6 701 aaKnown RBP7.87□□□□□ -1.15
SHPRH-210ENST00000523276 TSPY26PQ9H489 355 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 ATRNO75882 1429 aa7.87□□□□□ -1.15
SHPRH-210ENST00000523276 NWD2Q9ULI1 1742 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 RTL9Q8NET4 1388 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 ELP1O95163 1332 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 LETM1O95202 739 aaPredicted RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 NTSR2O95665 410 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 UQCRFS1P1P0C7P4 283 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 ADD2P35612 726 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 PHKA1P46020 1223 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 KRT85P78386 507 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 CCDC102BQ68D86 513 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 FERMT3Q86UX7 667 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 NUP98P52948 1817 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 GPAA1O43292 621 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 FGAP02671 866 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 APOBRQ0VD83 1088 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 UBE3CQ15386 1083 aa7.86□□□□□ -1.15
SHPRH-210ENST00000523276 NSUN7Q8NE18 718 aaKnown RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 TRIM44Q96DX7 344 aaPredicted RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 ZNF274Q96GC6 653 aaPredicted RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 PIH1D3Q9NQM4 214 aaKnown RBP7.86□□□□□ -1.15
SHPRH-210ENST00000523276 FAM177BA6PVY3 158 aa7.85□□□□□ -1.15
SHPRH-210ENST00000523276 KCNQ2O43526 872 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms