RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FAM43AQ8N2R8 423 aa18.1■□□□□ 0.49
NKX3-1-202ENST00000523261 PCDHAC2Q9Y5I4 1007 aa18.1■□□□□ 0.49
NKX3-1-202ENST00000523261 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
NKX3-1-202ENST00000523261 GNRH1P01148 92 aa18.09■□□□□ 0.49
NKX3-1-202ENST00000523261 PRMT2P55345 433 aa18.09■□□□□ 0.49
NKX3-1-202ENST00000523261 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
NKX3-1-202ENST00000523261 CLRN2A0PK11 232 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 GJB1P08034 283 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 GTF2IP78347 998 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 KIF22Q14807 665 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 GPR153Q6NV75 609 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 STXBP5LQ9Y2K9 1186 aa18.08■□□□□ 0.48
NKX3-1-202ENST00000523261 SPEF2Q9C093 1822 aa18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 AOX1Q06278 1338 aa18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 TLR2O60603 784 aa18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 GTF2A2P52657 109 aa18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 JARID2Q92833 1246 aaPredicted RBP18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 CDC5LQ99459 802 aaKnown RBP18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
NKX3-1-202ENST00000523261 KLRK1P26718 216 aa18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 RIPK4P57078 832 aa18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 CERS5Q8N5B7 392 aa18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
NKX3-1-202ENST00000523261 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 CCL5P13501 91 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 RASA3Q14644 834 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 Q7L0L9 218 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 CCDC191Q8NCU4 936 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 PRMT6Q96LA8 375 aaPredicted RBP18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 VEZTQ9HBM0 779 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 LEMD3Q9Y2U8 911 aa18.05■□□□□ 0.48
NKX3-1-202ENST00000523261 MYO1BO43795 1136 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 FARP2O94887 1054 aaPredicted RBP18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 HOXB7P09629 217 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 CTGFP29279 349 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 GRK4P32298 578 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 CFAP100Q494V2 611 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 SRRDQ9UH36 339 aa18.04■□□□□ 0.48
NKX3-1-202ENST00000523261 CHL1O00533 1208 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 EVI5O60447 810 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 CTSWP56202 376 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 MYD88Q99836 296 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 RNF208Q9H0X6 261 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
NKX3-1-202ENST00000523261 VGLL4Q14135 290 aa18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 U2AF1L4Q8WU68 220 aaKnown RBP18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 TRIM47Q96LD4 638 aa18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
NKX3-1-202ENST00000523261 ECM2O94769 699 aaPredicted RBP18.01■□□□□ 0.47
NKX3-1-202ENST00000523261 GOLGA2Q08379 1002 aa18.01■□□□□ 0.47
NKX3-1-202ENST00000523261 TTLL11Q8NHH1 800 aa18.01■□□□□ 0.47
NKX3-1-202ENST00000523261 GREM2Q9H772 168 aa18.01■□□□□ 0.47
NKX3-1-202ENST00000523261 CD209Q9NNX6 404 aa18.01■□□□□ 0.47
NKX3-1-202ENST00000523261 BTBD19C9JJ37 291 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 F8W031 263 aaPredicted RBP18■□□□□ 0.47
NKX3-1-202ENST00000523261 OSBPP22059 807 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 BMP8BP34820 402 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 MAP3K9P80192 1104 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 C17orf99Q6UX52 265 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 CDAN1Q8IWY9 1227 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 RAET1EQ8TD07 263 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 TEPSINQ96N21 525 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 GDF15Q99988 308 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 VCANP13611 3396 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 MYH3P11055 1940 aa18■□□□□ 0.47
NKX3-1-202ENST00000523261 CETPP11597 493 aa17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 PSMC4P43686 418 aa17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 ALPK3Q96L96 1907 aa17.99■□□□□ 0.47
NKX3-1-202ENST00000523261 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 SGPL1O95470 568 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 HOXD10P28358 340 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 TNFAIP1Q13829 316 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 PHAXQ9H814 394 aaKnown RBP17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 CSADQ9Y600 493 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 MYPNQ86TC9 1320 aa17.98■□□□□ 0.47
NKX3-1-202ENST00000523261 UBXN2AP68543 259 aa17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 LRIT3Q3SXY7 679 aa17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 ANKRD2Q9GZV1 360 aa17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
NKX3-1-202ENST00000523261 CPA4Q9UI42 421 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms