RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 UBE3CQ15386 1083 aa20.07■□□□□ 0.8
SREK1-212ENST00000522912 PROM2Q8N271 834 aa20.07■□□□□ 0.8
SREK1-212ENST00000522912 ZNF532Q9HCE3 1301 aa20.07■□□□□ 0.8
SREK1-212ENST00000522912 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
SREK1-212ENST00000522912 ZNF772Q68DY9 489 aaPredicted RBP20.07■□□□□ 0.8
SREK1-212ENST00000522912 FOXD4L5Q5VV16 416 aaPredicted RBP20.06■□□□□ 0.8
SREK1-212ENST00000522912 NECAB1Q8N987 351 aa20.06■□□□□ 0.8
SREK1-212ENST00000522912 FOXD4L4Q8WXT5 416 aaPredicted RBP20.06■□□□□ 0.8
SREK1-212ENST00000522912 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.06■□□□□ 0.8
SREK1-212ENST00000522912 ZNF804BA4D1E1 1349 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 GYS1P13807 737 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 E7EWF7 191 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 FGAP02671 866 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 GYG1P46976 350 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 TXNRD1Q16881 649 aa20.05■□□□□ 0.8
SREK1-212ENST00000522912 NPHP1O15259 732 aa20.04■□□□□ 0.8
SREK1-212ENST00000522912 SMC3Q9UQE7 1217 aa20.04■□□□□ 0.8
SREK1-212ENST00000522912 DTNBO60941 627 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 Q6ZUG5 572 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 CNBD1Q8NA66 436 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 CTNNA3Q9UI47 895 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 IQSEC3Q9UPP2 1182 aaPredicted RBP20.03■□□□□ 0.8
SREK1-212ENST00000522912 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 MCTP1Q6DN14 999 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 CHAMP1Q96JM3 812 aa20.03■□□□□ 0.8
SREK1-212ENST00000522912 HMGB1P09429 215 aaKnown RBP20.02■□□□□ 0.8
SREK1-212ENST00000522912 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
SREK1-212ENST00000522912 PRR5LQ6MZQ0 368 aa20.02■□□□□ 0.8
SREK1-212ENST00000522912 DHX32Q7L7V1 743 aaKnown RBP20.02■□□□□ 0.8
SREK1-212ENST00000522912 MAGEB6Q8N7X4 407 aa20.02■□□□□ 0.8
SREK1-212ENST00000522912 LRRC2Q9BYS8 371 aa20.02■□□□□ 0.8
SREK1-212ENST00000522912 PTMSP20962 102 aa20.02■□□□□ 0.79
SREK1-212ENST00000522912 HAND2P61296 217 aa20.02■□□□□ 0.79
SREK1-212ENST00000522912 FAM84BQ96KN1 310 aaPredicted RBP20.02■□□□□ 0.79
SREK1-212ENST00000522912 COL1A1P02452 1464 aaPredicted RBP20.01■□□□□ 0.79
SREK1-212ENST00000522912 GOLGA6L22H0YM25 854 aa20.01■□□□□ 0.79
SREK1-212ENST00000522912 GJB2P29033 226 aa20.01■□□□□ 0.79
SREK1-212ENST00000522912 IMMTQ16891 758 aaKnown RBP20.01■□□□□ 0.79
SREK1-212ENST00000522912 KLRK1P26718 216 aa20■□□□□ 0.79
SREK1-212ENST00000522912 STRBPQ96SI9 672 aaKnown RBP20■□□□□ 0.79
SREK1-212ENST00000522912 GNL3LQ9NVN8 582 aaKnown RBP20■□□□□ 0.79
SREK1-212ENST00000522912 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
SREK1-212ENST00000522912 SYT1P21579 422 aa20■□□□□ 0.79
SREK1-212ENST00000522912 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
SREK1-212ENST00000522912 ANKRD2Q9GZV1 360 aa20■□□□□ 0.79
SREK1-212ENST00000522912 STK3Q13188 491 aa19.99■□□□□ 0.79
SREK1-212ENST00000522912 CAVIN4Q5BKX8 364 aa19.99■□□□□ 0.79
SREK1-212ENST00000522912 SERPINB2P05120 415 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 BRF1Q92994 677 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 AIDAQ96BJ3 306 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
SREK1-212ENST00000522912 LMBRD1Q9NUN5 540 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 MYH13Q9UKX3 1938 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 STX6O43752 255 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 GRAPQ13588 217 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 SKOR2Q2VWA4 1001 aaPredicted RBP19.98■□□□□ 0.79
SREK1-212ENST00000522912 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 GRAPLQ8TC17 118 aaPredicted RBP19.98■□□□□ 0.79
SREK1-212ENST00000522912 LRP2BPQ9P2M1 347 aa19.98■□□□□ 0.79
SREK1-212ENST00000522912 PLSCR1O15162 318 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 MBD4O95243 580 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 VPS37DQ86XT2 251 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 NBPF3Q9H094 633 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 TCHHQ07283 1943 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 ZNF213O14771 459 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 DDR1Q08345 913 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 ZNF827Q17R98 1081 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 CHST3Q7LGC8 479 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 ARMT1Q9H993 441 aa19.97■□□□□ 0.79
SREK1-212ENST00000522912 APBA3O96018 575 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 APPP05067 770 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 ZSCAN22P10073 491 aaPredicted RBP19.96■□□□□ 0.79
SREK1-212ENST00000522912 FGD1P98174 961 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 GTF3C6Q969F1 213 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 TFCP2L1Q9NZI6 479 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
SREK1-212ENST00000522912 APOBRQ0VD83 1088 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 ALX1Q15699 326 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 ABCF2Q9UG63 623 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 IRS2Q9Y4H2 1338 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 PATL2C9JE40 543 aaKnown RBP19.95■□□□□ 0.78
SREK1-212ENST00000522912 POLRMTO00411 1230 aaKnown RBP19.95■□□□□ 0.78
SREK1-212ENST00000522912 RXRBP28702 533 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 ST5P78524 1137 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 CRY2Q49AN0 593 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 TXNRD3Q86VQ6 643 aa19.95■□□□□ 0.78
SREK1-212ENST00000522912 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
SREK1-212ENST00000522912 EPB41L4AQ9HCS5 686 aaPredicted RBP19.95■□□□□ 0.78
SREK1-212ENST00000522912 HIBADHP31937 336 aaKnown RBP19.94■□□□□ 0.78
SREK1-212ENST00000522912 LCORLQ8N3X6 602 aa19.94■□□□□ 0.78
SREK1-212ENST00000522912 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
SREK1-212ENST00000522912 MTMR6Q9Y217 621 aa19.94■□□□□ 0.78
SREK1-212ENST00000522912 PFKFB2O60825 505 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 PRPF40AO75400 957 aaKnown RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 CYP7A1P22680 504 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 HMGB2P26583 209 aaKnown RBP19.93■□□□□ 0.78
SREK1-212ENST00000522912 ADGRA1Q86SQ6 560 aa19.93■□□□□ 0.78
SREK1-212ENST00000522912 TBC1D10CQ8IV04 446 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms