RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
CTNNA1-235ENST00000522730 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-235ENST00000522730 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
CTNNA1-235ENST00000522730 CA12O43570 354 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 TRPA1O75762 1119 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 GYG1P46976 350 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 SMC4Q9NTJ3 1288 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 PCDHAC2Q9Y5I4 1007 aa12.89□□□□□ -0.35
CTNNA1-235ENST00000522730 PITPNM2Q9BZ72 1349 aa12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 NF2P35240 595 aa12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 KLHDC4Q8TBB5 520 aa12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
CTNNA1-235ENST00000522730 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 FRAT2O75474 233 aaPredicted RBP12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 SLC10A3P09131 477 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 IL1R1P14778 569 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 METTL24Q5JXM2 366 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 VPS37DQ86XT2 251 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 VEZTQ9HBM0 779 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 PTPRCP08575 1304 aa12.87□□□□□ -0.35
CTNNA1-235ENST00000522730 MMP14P50281 582 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 FKBP1BP68106 108 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 RASAL3Q86YV0 1011 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 APOBEC3FQ8IUX4 373 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 USP44Q9H0E7 712 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 RNF186Q9NXI6 227 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 RIPOR2Q9Y4F9 1068 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 ZNF609O15014 1411 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 IRS2Q9Y4H2 1338 aa12.86□□□□□ -0.35
CTNNA1-235ENST00000522730 MYO1BO43795 1136 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 DGKZQ13574 1117 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 MIER1Q8N108 512 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 PRMT6Q96LA8 375 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 UTYO14607 1347 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 MROH5Q6ZUA9 1318 aa12.85□□□□□ -0.35
CTNNA1-235ENST00000522730 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 ZBED3Q96IU2 234 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-235ENST00000522730 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 BCAMP50895 628 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 POLA2Q14181 598 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 MCOLN1Q9GZU1 580 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 AOX1Q06278 1338 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 PSME4Q14997 1843 aa12.83□□□□□ -0.36
CTNNA1-235ENST00000522730 CCER2I3L3R5 266 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 PDE8BO95263 885 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 TRMT2AQ8IZ69 625 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 MTMR14Q8NCE2 650 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 SIL1Q9H173 461 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
CTNNA1-235ENST00000522730 THSD7BQ9C0I4 1608 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 TBC1D8O95759 1140 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 RASA3Q14644 834 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 FBXO33Q7Z6M2 555 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
CTNNA1-235ENST00000522730 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 EYA2O00167 538 aa12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 CRKP46108 304 aa12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 GRIK5Q16478 980 aa12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
CTNNA1-235ENST00000522730 DSG3P32926 999 aa12.79□□□□□ -0.36
CTNNA1-235ENST00000522730 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms