RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 A0A1B0GUL6 1792 aa27.27■■□□□ 1.96
HOXA3-205ENST00000522456 PTPN12Q05209 780 aaKnown RBP27.27■■□□□ 1.96
HOXA3-205ENST00000522456 METTL24Q5JXM2 366 aa27.27■■□□□ 1.96
HOXA3-205ENST00000522456 CCDC102AQ96A19 550 aa27.27■■□□□ 1.96
HOXA3-205ENST00000522456 CDCA5Q96FF9 252 aa27.27■■□□□ 1.96
HOXA3-205ENST00000522456 COA1Q9GZY4 146 aa27.27■■□□□ 1.96
HOXA3-205ENST00000522456 USP17L3A6NCW0 530 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 USP17L4A6NCW7 530 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 ZBTB7BO15156 539 aaPredicted RBP27.26■■□□□ 1.95
HOXA3-205ENST00000522456 KLRK1P26718 216 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 ZNF157P51786 506 aaPredicted RBP27.26■■□□□ 1.95
HOXA3-205ENST00000522456 SCARF1Q14162 830 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 ANGEL2Q5VTE6 544 aaKnown RBP27.26■■□□□ 1.95
HOXA3-205ENST00000522456 USP17L1Q7RTZ2 530 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.26■■□□□ 1.95
HOXA3-205ENST00000522456 GMLQ99445 158 aa27.26■■□□□ 1.95
HOXA3-205ENST00000522456 EYA2O00167 538 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 SRGAP3O43295 1099 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 USP17L8P0C7I0 530 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 MCOLN1Q9GZU1 580 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 SIL1Q9H173 461 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 MYOZ2Q9NPC6 264 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 CASP8AP2Q9UKL3 1982 aa27.25■■□□□ 1.95
HOXA3-205ENST00000522456 KIF23Q02241 960 aaPredicted RBP27.23■■□□□ 1.95
HOXA3-205ENST00000522456 MTX1Q13505 466 aa27.23■■□□□ 1.95
HOXA3-205ENST00000522456 UBE4AQ14139 1066 aa27.23■■□□□ 1.95
HOXA3-205ENST00000522456 PDE8BO95263 885 aa27.22■■□□□ 1.95
HOXA3-205ENST00000522456 SLC10A3P09131 477 aa27.22■■□□□ 1.95
HOXA3-205ENST00000522456 C15orf52Q6ZUT6 534 aaKnown RBP27.22■■□□□ 1.95
HOXA3-205ENST00000522456 SAGE1Q9NXZ1 904 aa27.22■■□□□ 1.95
HOXA3-205ENST00000522456 PA2G4Q9UQ80 394 aaKnown RBP27.22■■□□□ 1.95
HOXA3-205ENST00000522456 PITPNM2Q9BZ72 1349 aa27.21■■□□□ 1.95
HOXA3-205ENST00000522456 C1orf115Q9H7X2 142 aa27.21■■□□□ 1.95
HOXA3-205ENST00000522456 FBXO3Q9UK99 471 aa27.21■■□□□ 1.95
HOXA3-205ENST00000522456 COG6Q9Y2V7 657 aa27.21■■□□□ 1.95
HOXA3-205ENST00000522456 MYO3BQ8WXR4 1341 aa27.2■■□□□ 1.95
HOXA3-205ENST00000522456 CIAO1O76071 339 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 DGKZQ13574 1117 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 MVPQ14764 893 aaKnown RBP27.2■■□□□ 1.94
HOXA3-205ENST00000522456 ATG9AQ7Z3C6 839 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 ZNF804AQ7Z570 1209 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 FBXW7Q969H0 707 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 COPRSQ9NQ92 184 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.94
HOXA3-205ENST00000522456 IRS2Q9Y4H2 1338 aa27.19■■□□□ 1.94
HOXA3-205ENST00000522456 STRIP1Q5VSL9 837 aa27.19■■□□□ 1.94
HOXA3-205ENST00000522456 CD209Q9NNX6 404 aa27.19■■□□□ 1.94
HOXA3-205ENST00000522456 ZNF646O15015 1829 aaPredicted RBP27.18■■□□□ 1.94
HOXA3-205ENST00000522456 PNMA6EA0A0J9YXQ4 647 aa27.18■■□□□ 1.94
HOXA3-205ENST00000522456 FKBP1BP68106 108 aa27.18■■□□□ 1.94
HOXA3-205ENST00000522456 VGLL2Q8N8G2 317 aa27.18■■□□□ 1.94
HOXA3-205ENST00000522456 DDX19BQ9UMR2 479 aa27.18■■□□□ 1.94
HOXA3-205ENST00000522456 IL15P40933 162 aaPredicted RBP27.17■■□□□ 1.94
HOXA3-205ENST00000522456 PDE3AQ14432 1141 aa27.17■■□□□ 1.94
HOXA3-205ENST00000522456 DACT2Q5SW24 774 aa27.17■■□□□ 1.94
HOXA3-205ENST00000522456 CEP126Q9P2H0 1117 aa27.17■■□□□ 1.94
HOXA3-205ENST00000522456 GYG1P46976 350 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 ATP8B2P98198 1209 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 PUM3Q15397 648 aaKnown RBP27.16■■□□□ 1.94
HOXA3-205ENST00000522456 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 RASAL3Q86YV0 1011 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 MXD3Q9BW11 206 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 RNF186Q9NXI6 227 aa27.16■■□□□ 1.94
HOXA3-205ENST00000522456 TRPA1O75762 1119 aa27.15■■□□□ 1.94
HOXA3-205ENST00000522456 HIBADHP31937 336 aaKnown RBP27.15■■□□□ 1.94
HOXA3-205ENST00000522456 RGS19P49795 217 aa27.15■■□□□ 1.94
HOXA3-205ENST00000522456 MLLT1Q03111 559 aaPredicted RBP27.15■■□□□ 1.94
HOXA3-205ENST00000522456 TTLL5Q6EMB2 1281 aa27.15■■□□□ 1.94
HOXA3-205ENST00000522456 OGFOD1Q8N543 542 aa27.15■■□□□ 1.94
HOXA3-205ENST00000522456 SCAF8Q9UPN6 1271 aaKnown RBP27.15■■□□□ 1.94
HOXA3-205ENST00000522456 AKAP11Q9UKA4 1901 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 MMP14P50281 582 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 GTF2IP78347 998 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 NBPF9Q3BBW0 867 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 CAVIN4Q5BKX8 364 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 FAM84BQ96KN1 310 aaPredicted RBP27.14■■□□□ 1.94
HOXA3-205ENST00000522456 CSRNP1Q96S65 589 aa27.14■■□□□ 1.94
HOXA3-205ENST00000522456 CHMP4BQ9H444 224 aaKnown RBP27.14■■□□□ 1.94
HOXA3-205ENST00000522456 IFIT1P09914 478 aaKnown RBP27.13■■□□□ 1.93
HOXA3-205ENST00000522456 IL1R1P14778 569 aa27.13■■□□□ 1.93
HOXA3-205ENST00000522456 VPS37DQ86XT2 251 aa27.13■■□□□ 1.93
HOXA3-205ENST00000522456 REM2Q8IYK8 340 aaPredicted RBP27.12■■□□□ 1.93
HOXA3-205ENST00000522456 SLC5A1P13866 664 aa27.11■■□□□ 1.93
HOXA3-205ENST00000522456 FGFR2P21802 821 aa27.11■■□□□ 1.93
HOXA3-205ENST00000522456 G3BP1Q13283 466 aaKnown RBP eCLIP27.11■■□□□ 1.93
HOXA3-205ENST00000522456 POLA2Q14181 598 aa27.11■■□□□ 1.93
HOXA3-205ENST00000522456 SSH3Q8TE77 659 aa27.11■■□□□ 1.93
HOXA3-205ENST00000522456 LPIN2Q92539 896 aa27.11■■□□□ 1.93
HOXA3-205ENST00000522456 WNT10BO00744 389 aa27.1■■□□□ 1.93
HOXA3-205ENST00000522456 ATP2B3Q16720 1220 aa27.1■■□□□ 1.93
HOXA3-205ENST00000522456 MOB2Q70IA6 237 aa27.1■■□□□ 1.93
HOXA3-205ENST00000522456 SASH1O94885 1247 aa27.09■■□□□ 1.93
HOXA3-205ENST00000522456 PRAMEF18Q5VWM3 479 aa27.09■■□□□ 1.93
HOXA3-205ENST00000522456 CEP85Q6P2H3 762 aa27.09■■□□□ 1.93
HOXA3-205ENST00000522456 FBXO33Q7Z6M2 555 aa27.09■■□□□ 1.93
HOXA3-205ENST00000522456 TDRD7Q8NHU6 1098 aaKnown RBP27.09■■□□□ 1.93
HOXA3-205ENST00000522456 ZBTB40Q9NUA8 1239 aa27.09■■□□□ 1.93
HOXA3-205ENST00000522456 FRAT2O75474 233 aaPredicted RBP27.08■■□□□ 1.93
HOXA3-205ENST00000522456 BCAMP50895 628 aa27.08■■□□□ 1.93
HOXA3-205ENST00000522456 TFCP2Q12800 502 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms