RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 PRKG1Q13976 671 aa11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 CC2D1BQ5T0F9 858 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 SHISA4Q96DD7 197 aa11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
TRAPPC9-212ENST00000521944 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 TBC1D12O60347 775 aa11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 ANXA1P04083 346 aa11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 INHBEP58166 350 aa11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
TRAPPC9-212ENST00000521944 WNT10BO00744 389 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 HTATSF1O43719 755 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 GJA5P36382 358 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 SP3Q02447 781 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 SLC4A8Q2Y0W8 1093 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 EYA3Q99504 573 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
TRAPPC9-212ENST00000521944 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 DPF3Q92784 378 aa11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 WNK4Q96J92 1243 aa11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 ZC3H12CQ9C0D7 883 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 MUC3AQ02505 3323 aa11.8□□□□□ -0.52
TRAPPC9-212ENST00000521944 PSME4Q14997 1843 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 SLC9C1Q4G0N8 1177 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 ARMC9Q7Z3E5 817 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 EYSQ5T1H1 3165 aa11.79□□□□□ -0.52
TRAPPC9-212ENST00000521944 LAMB1P07942 1786 aa11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 RPS8P62241 208 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 PRUNE2Q8WUY3 3088 aa11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
TRAPPC9-212ENST00000521944 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 UFL1O94874 794 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 SASH1O94885 1247 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 NF2P35240 595 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 MTFR1Q15390 333 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 ZBED3Q96IU2 234 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 ARHGAP39Q9C0H5 1083 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.53
TRAPPC9-212ENST00000521944 EMP3P54852 163 aa11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 DACT2Q5SW24 774 aa11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 Q7L0L9 218 aa11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 ZNF646O15015 1829 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-212ENST00000521944 A0A1W2PPC1 479 aa11.75□□□□□ -0.53
TRAPPC9-212ENST00000521944 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-212ENST00000521944 ARSIQ5FYB1 569 aa11.75□□□□□ -0.53
TRAPPC9-212ENST00000521944 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 OXER1Q8TDS5 423 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 PNISRQ8TF01 805 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 DEFB129Q9H1M3 183 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 ANKIB1Q9P2G1 1089 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
TRAPPC9-212ENST00000521944 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
TRAPPC9-212ENST00000521944 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-212ENST00000521944 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-212ENST00000521944 DEFB123Q8N688 67 aa11.73□□□□□ -0.53
TRAPPC9-212ENST00000521944 MTMR10Q9NXD2 777 aa11.73□□□□□ -0.53
TRAPPC9-212ENST00000521944 POTEMA6NI47 508 aa11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 USP2O75604 605 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 CTGFP29279 349 aa11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 E2F4Q16254 413 aa11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
TRAPPC9-212ENST00000521944 BRI3BPQ8WY22 251 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms