RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 USP26Q9BXU7 913 aa8.18□□□□□ -1.1
CTNNA1-228ENST00000521640 TOR4AQ9NXH8 423 aa8.18□□□□□ -1.1
CTNNA1-228ENST00000521640 C9orf78Q9NZ63 289 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-228ENST00000521640 AK9Q5TCS8 1911 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 NEURL1BA8MQ27 555 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 SURF6O75683 361 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 GCKRQ14397 625 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 RABL6Q3YEC7 729 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 C16orf71Q8IYS4 520 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 OTUD7AQ8TE49 926 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 FOXJ1Q92949 421 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 ARXQ96QS3 562 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 CHMP5Q9NZZ3 219 aa8.17□□□□□ -1.1
CTNNA1-228ENST00000521640 PRAMEF22A3QJZ6 481 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 GLRX3O76003 335 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 IGKV5-2P06315 115 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 DDIT3P35638 169 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 EVA1CP58658 441 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 TJP1Q07157 1748 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 SLC39A6Q13433 755 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 LAPTM4AQ15012 233 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 NFKBIBQ15653 356 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 RFX7Q2KHR2 1363 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 TMEM259Q4ZIN3 620 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 COPS6Q7L5N1 327 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 CLASRPQ8N2M8 674 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 XAGE3Q8WTP9 111 aa8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 THRAP3Q9Y2W1 955 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-228ENST00000521640 ITGB4P16144 1822 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 PHLPP1O60346 1717 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 SIAH2O43255 324 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 ANXA1P04083 346 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 PTMSP20962 102 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 MCCP23508 829 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 MCM2P49736 904 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 Q6ZNB5 142 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 CNTROBQ8N137 903 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 EHBP1Q8NDI1 1231 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 PI4K2BQ8TCG2 481 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 ESYT1Q9BSJ8 1104 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 COPRSQ9NQ92 184 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 USP16Q9Y5T5 823 aa8.15□□□□□ -1.1
CTNNA1-228ENST00000521640 ZNF831Q5JPB2 1677 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 RAD50Q92878 1312 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 HIP1O00291 1037 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 CHMLP26374 656 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 TRIM28Q13263 835 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 CYP4X1Q8N118 509 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 KAZALD1Q96I82 304 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 SUCLG2Q96I99 432 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 ECHDC1Q9NTX5 307 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 TMOD3Q9NYL9 352 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 RREB1Q92766 1687 aa8.14□□□□□ -1.11
CTNNA1-228ENST00000521640 BCL9O00512 1426 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 J3QL48 77 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 APBB1O00213 710 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 CASP7P55210 303 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 CCDC191Q8NCU4 936 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 SNIP1Q8TAD8 396 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 RUFY2Q8WXA3 655 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 MYD88Q99836 296 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 BICC1Q9H694 974 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
CTNNA1-228ENST00000521640 ANKRD36CQ5JPF3 1778 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 TTC24A2A3L6 582 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 H7C1W4 665 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 MYL6BP14649 208 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 SMPD1P17405 629 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 AIMP1Q12904 312 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 G3BP1Q13283 466 aaKnown RBP eCLIP8.12□□□□□ -1.112e-7■■■□□ 16.3
CTNNA1-228ENST00000521640 OS9Q13438 667 aaPredicted RBP8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 CLEC17AQ6ZS10 378 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 EVI5LQ96CN4 794 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 IL1RAPL2Q9NP60 686 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 GPR108Q9NPR9 543 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 STRN4Q9NRL3 753 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 BTG4Q9NY30 223 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 FKBPLQ9UIM3 349 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
CTNNA1-228ENST00000521640 SGSM2O43147 1006 aa8.11□□□□□ -1.11
CTNNA1-228ENST00000521640 STARD3NLO95772 234 aa8.11□□□□□ -1.11
CTNNA1-228ENST00000521640 IFIT2P09913 472 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-228ENST00000521640 RFX5P48382 616 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-228ENST00000521640 HSP90AB3PQ58FF7 597 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms