RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
RUNX1T1-234ENST00000521553 CPSF1Q10570 1443 aaKnown RBP8.89□□□□□ -0.99
RUNX1T1-234ENST00000521553 CD163L1Q9NR16 1453 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 NRAPQ86VF7 1730 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 ZBTB7CA1YPR0 619 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 PRRT3Q5FWE3 981 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 SLC12A5Q9H2X9 1139 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 RGS17Q9UGC6 210 aaPredicted RBP8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 USP21Q9UK80 565 aa8.88□□□□□ -0.99
RUNX1T1-234ENST00000521553 ATP4AP20648 1035 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 SMTNP53814 917 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 IRF5Q13568 498 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 POTEAQ6S8J7 498 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 PUS7Q96PZ0 661 aaKnown RBP8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 TTC21AQ8NDW8 1320 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 USP54Q70EL1 1684 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 LTN1O94822 1766 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 EDC4Q6P2E9 1401 aaKnown RBP8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 SLIT3O75094 1523 aa8.87□□□□□ -0.99
RUNX1T1-234ENST00000521553 A0A1W2PNR3 127 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 MAPTP10636 758 aaKnown RBP8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 TNP2Q05952 138 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 FAM182BQ5T319 152 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 PRDM11Q9NQV5 511 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
RUNX1T1-234ENST00000521553 DCDC2BA2VCK2 349 aa8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 ZC3H6P61129 1189 aaKnown RBP8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 VAC14Q08AM6 782 aa8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 QTRT2Q9H974 415 aaKnown RBP8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 KLF15Q9UIH9 416 aa8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 KIAA0232Q92628 1395 aa8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 RGPD5Q99666 1765 aa8.85□□□□□ -0.99
RUNX1T1-234ENST00000521553 KHNYNO15037 678 aaKnown RBP8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 CD33P20138 364 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 RXRBP28702 533 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 CHRNA2Q15822 529 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 NME9Q86XW9 330 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 SERTAD1Q9UHV2 236 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 USP19O94966 1318 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 SLIT2O94813 1529 aa8.84□□□□□ -0.99
RUNX1T1-234ENST00000521553 ATRNO75882 1429 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
RUNX1T1-234ENST00000521553 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 FCHSD1Q86WN1 690 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
RUNX1T1-234ENST00000521553 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 LMO7Q8WWI1 1683 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 BTG4Q9NY30 223 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 HCN2Q9UL51 889 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 ANKRD26Q9UPS8 1709 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 GLI3P10071 1580 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 NFAT5O94916 1531 aa8.83□□□□□ -1
RUNX1T1-234ENST00000521553 FAM83GA6ND36 823 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 CDK2AP1O14519 115 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 GCP02774 474 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 UNC5CLQ8IV45 518 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 NACC1Q96RE7 527 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 ZIC5Q96T25 663 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 STRN4Q9NRL3 753 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 ZDHHC3Q9NYG2 299 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 PRR12Q9ULL5 1215 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 GJA3Q9Y6H8 435 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 OVOS2A0A0J9YW53 1432 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 RGS12O14924 1447 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 OVOS2Q6IE36 1432 aa8.82□□□□□ -1
RUNX1T1-234ENST00000521553 A6NJY4 79 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 COBLO75128 1261 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 RBM6P78332 1123 aaKnown RBP8.81□□□□□ -1
RUNX1T1-234ENST00000521553 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 CPDO75976 1380 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 USP31Q70CQ4 1352 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 COL18A1P39060 1754 aa8.81□□□□□ -1
RUNX1T1-234ENST00000521553 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 PCBP4P57723 403 aaKnown RBP8.8□□□□□ -1
RUNX1T1-234ENST00000521553 EVA1CP58658 441 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 SEMA3FQ13275 785 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 MTFR1Q15390 333 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 WASHC4Q2M389 1173 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 COG3Q96JB2 828 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 IQSEC3Q9UPP2 1182 aaPredicted RBP8.8□□□□□ -1
RUNX1T1-234ENST00000521553 CAMTA1Q9Y6Y1 1673 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 CDK12Q9NYV4 1490 aaPredicted RBP8.8□□□□□ -1
RUNX1T1-234ENST00000521553 BRWD3Q6RI45 1802 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
RUNX1T1-234ENST00000521553 HYAL3O43820 417 aaPredicted RBP8.8□□□□□ -1
RUNX1T1-234ENST00000521553 FAM157BP0CG42 384 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms