RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 TRIM17Q9Y577 477 aa17.3■□□□□ 0.36
SPARC-203ENST00000521327 PSME4Q14997 1843 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 MYO1BO43795 1136 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
SPARC-203ENST00000521327 SUPT20HL1Q3ZLR7 823 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 WNK4Q96J92 1243 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
SPARC-203ENST00000521327 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
SPARC-203ENST00000521327 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
SPARC-203ENST00000521327 IGF2BP3O00425 579 aaKnown RBP eCLIP17.28■□□□□ 0.36
SPARC-203ENST00000521327 IFIT5Q13325 482 aaKnown RBP17.28■□□□□ 0.36
SPARC-203ENST00000521327 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
SPARC-203ENST00000521327 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
SPARC-203ENST00000521327 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
SPARC-203ENST00000521327 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
SPARC-203ENST00000521327 PPP2R3BQ9Y5P8 575 aa17.28■□□□□ 0.36
SPARC-203ENST00000521327 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
SPARC-203ENST00000521327 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
SPARC-203ENST00000521327 IL1R1P14778 569 aa17.27■□□□□ 0.36
SPARC-203ENST00000521327 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.36
SPARC-203ENST00000521327 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.36
SPARC-203ENST00000521327 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
SPARC-203ENST00000521327 AOX1Q06278 1338 aa17.26■□□□□ 0.35
SPARC-203ENST00000521327 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
SPARC-203ENST00000521327 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
SPARC-203ENST00000521327 FOXO4P98177 505 aa17.26■□□□□ 0.35
SPARC-203ENST00000521327 CCDC184Q52MB2 194 aa17.26■□□□□ 0.35
SPARC-203ENST00000521327 COL1A1P02452 1464 aaPredicted RBP17.25■□□□□ 0.35
SPARC-203ENST00000521327 UNCXA6NJT0 531 aa17.25■□□□□ 0.35
SPARC-203ENST00000521327 PLIN1O60240 522 aa17.25■□□□□ 0.35
SPARC-203ENST00000521327 RASA3Q14644 834 aa17.25■□□□□ 0.35
SPARC-203ENST00000521327 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
SPARC-203ENST00000521327 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
SPARC-203ENST00000521327 SSC5DA1L4H1 1573 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 POTEFA5A3E0 1075 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 F6X3S4 739 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 GJA5P36382 358 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
SPARC-203ENST00000521327 CRHR2Q13324 411 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 LMBR1LQ6UX01 489 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
SPARC-203ENST00000521327 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
SPARC-203ENST00000521327 IL16Q14005 1332 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 VAMP4O75379 141 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 ANKRD13AQ8IZ07 590 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 PTPN18Q99952 460 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 PTPN22Q9Y2R2 807 aa17.23■□□□□ 0.35
SPARC-203ENST00000521327 HTTP42858 3142 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 EPHA10Q5JZY3 1008 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
SPARC-203ENST00000521327 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
SPARC-203ENST00000521327 MKI67P46013 3256 aaKnown RBP17.21■□□□□ 0.35
SPARC-203ENST00000521327 SP3Q02447 781 aa17.21■□□□□ 0.35
SPARC-203ENST00000521327 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
SPARC-203ENST00000521327 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
SPARC-203ENST00000521327 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
SPARC-203ENST00000521327 SPEF2Q9C093 1822 aa17.2■□□□□ 0.34
SPARC-203ENST00000521327 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
SPARC-203ENST00000521327 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
SPARC-203ENST00000521327 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
SPARC-203ENST00000521327 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
SPARC-203ENST00000521327 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
SPARC-203ENST00000521327 OPTNQ96CV9 577 aa17.2■□□□□ 0.34
SPARC-203ENST00000521327 TDRD3Q9H7E2 651 aaKnown RBP17.2■□□□□ 0.34
SPARC-203ENST00000521327 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
SPARC-203ENST00000521327 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
SPARC-203ENST00000521327 GYG1P46976 350 aa17.19■□□□□ 0.34
SPARC-203ENST00000521327 CAP1Q01518 475 aa17.19■□□□□ 0.34
SPARC-203ENST00000521327 CDAN1Q8IWY9 1227 aa17.19■□□□□ 0.34
SPARC-203ENST00000521327 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
SPARC-203ENST00000521327 SERPINA10Q9UK55 444 aa17.19■□□□□ 0.34
SPARC-203ENST00000521327 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
SPARC-203ENST00000521327 GRM8O00222 908 aa17.18■□□□□ 0.34
SPARC-203ENST00000521327 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
SPARC-203ENST00000521327 HABP4Q5JVS0 413 aaKnown RBP17.18■□□□□ 0.34
SPARC-203ENST00000521327 DZIP1LQ8IYY4 767 aaKnown RBP17.18■□□□□ 0.34
SPARC-203ENST00000521327 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
SPARC-203ENST00000521327 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
SPARC-203ENST00000521327 MS4A4AQ96JQ5 239 aa17.18■□□□□ 0.34
SPARC-203ENST00000521327 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
SPARC-203ENST00000521327 MYH3P11055 1940 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 CENPFP49454 3210 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 TCP10L2B9ZVM9 353 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
SPARC-203ENST00000521327 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.17■□□□□ 0.34
SPARC-203ENST00000521327 BRI3BPQ8WY22 251 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 FAM84BQ96KN1 310 aaPredicted RBP17.17■□□□□ 0.34
SPARC-203ENST00000521327 TEPSINQ96N21 525 aa17.17■□□□□ 0.34
SPARC-203ENST00000521327 TMEM39BQ9GZU3 492 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms