RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 SCNN1DP51172 638 aa12.83□□□□□ -0.36
TRIM35-204ENST00000521283 FOXO4P98177 505 aa12.83□□□□□ -0.36
TRIM35-204ENST00000521283 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
TRIM35-204ENST00000521283 ZNF609O15014 1411 aa12.82□□□□□ -0.36
TRIM35-204ENST00000521283 ECE2O60344 883 aa12.82□□□□□ -0.36
TRIM35-204ENST00000521283 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
TRIM35-204ENST00000521283 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
TRIM35-204ENST00000521283 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
TRIM35-204ENST00000521283 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 RAD17O75943 681 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
TRIM35-204ENST00000521283 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRIM35-204ENST00000521283 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 AGBL3Q8NEM8 1001 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 COA1Q9GZY4 146 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
TRIM35-204ENST00000521283 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 PSME4Q14997 1843 aa12.81□□□□□ -0.36
TRIM35-204ENST00000521283 YDJCA8MPS7 323 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-204ENST00000521283 KCNJ4P48050 445 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-204ENST00000521283 RARSP54136 660 aaKnown RBP12.8□□□□□ -0.36
TRIM35-204ENST00000521283 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-204ENST00000521283 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 C15orf52Q6ZUT6 534 aaKnown RBP12.8□□□□□ -0.36
TRIM35-204ENST00000521283 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
TRIM35-204ENST00000521283 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 PSMD14O00487 310 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
TRIM35-204ENST00000521283 EPS15P42566 896 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 CHRNDQ07001 517 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 PASKQ96RG2 1323 aa12.79□□□□□ -0.36
TRIM35-204ENST00000521283 COL4A1P02462 1669 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 TMEM88BA6NKF7 163 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
TRIM35-204ENST00000521283 PDE4AP27815 886 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 DNAJC5GQ8N7S2 189 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 NOB1Q9ULX3 412 aaKnown RBP12.78□□□□□ -0.36
TRIM35-204ENST00000521283 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
TRIM35-204ENST00000521283 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRIM35-204ENST00000521283 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
TRIM35-204ENST00000521283 OGFOD1Q8N543 542 aa12.77□□□□□ -0.37
TRIM35-204ENST00000521283 SUCLG2Q96I99 432 aa12.77□□□□□ -0.37
TRIM35-204ENST00000521283 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 UBTFL1P0CB47 393 aaPredicted RBP12.76□□□□□ -0.37
TRIM35-204ENST00000521283 UBE4AQ14139 1066 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
TRIM35-204ENST00000521283 SCN9AQ15858 1988 aa12.76□□□□□ -0.37
TRIM35-204ENST00000521283 TBC1D12O60347 775 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 GNAI3P08754 354 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 PBX2P40425 430 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 MAP1SQ66K74 1059 aaPredicted RBP12.75□□□□□ -0.37
TRIM35-204ENST00000521283 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
TRIM35-204ENST00000521283 JMYQ8N9B5 988 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 KAZALD1Q96I82 304 aa12.75□□□□□ -0.37
TRIM35-204ENST00000521283 ZNF280AP59817 542 aaPredicted RBP12.74□□□□□ -0.37
TRIM35-204ENST00000521283 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
TRIM35-204ENST00000521283 TTLL5Q6EMB2 1281 aa12.74□□□□□ -0.37
TRIM35-204ENST00000521283 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
TRIM35-204ENST00000521283 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
TRIM35-204ENST00000521283 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
TRIM35-204ENST00000521283 A0A1B0GUL6 1792 aa12.74□□□□□ -0.37
TRIM35-204ENST00000521283 IL1R1P14778 569 aa12.73□□□□□ -0.37
TRIM35-204ENST00000521283 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
TRIM35-204ENST00000521283 GMLQ99445 158 aa12.73□□□□□ -0.37
TRIM35-204ENST00000521283 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
TRIM35-204ENST00000521283 CD209Q9NNX6 404 aa12.73□□□□□ -0.37
TRIM35-204ENST00000521283 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
TRIM35-204ENST00000521283 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 SASH1O94885 1247 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 MS4A1P11836 297 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 KIF4BQ2VIQ3 1234 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 DACT2Q5SW24 774 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
TRIM35-204ENST00000521283 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 TAF5LO75529 589 aa12.71□□□□□ -0.37
TRIM35-204ENST00000521283 CIAO1O76071 339 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms