RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 GGNBP2Q9H3C7 697 aa8.78□□□□□ -1
CLK4-207ENST00000520909 WDR64B1ANS9 1081 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 ADAMTS4O75173 837 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 TRPA1O75762 1119 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 GIMAP7Q8NHV1 300 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 HELQQ8TDG4 1101 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 SOX13Q9UN79 622 aa8.77□□□□□ -1.01
CLK4-207ENST00000520909 PDGFAP04085 211 aa8.76□□□□□ -1.01
CLK4-207ENST00000520909 MZF1P28698 734 aaPredicted RBP8.76□□□□□ -1.01
CLK4-207ENST00000520909 NUTM2GQ5VZR2 741 aa8.76□□□□□ -1.01
CLK4-207ENST00000520909 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
CLK4-207ENST00000520909 MAP4P27816 1152 aaKnown RBP8.75□□□□□ -1.01
CLK4-207ENST00000520909 IKBKEQ14164 716 aa8.75□□□□□ -1.01
CLK4-207ENST00000520909 C12orf50Q8NA57 414 aaPredicted RBP8.75□□□□□ -1.01
CLK4-207ENST00000520909 BSNDQ8WZ55 320 aa8.75□□□□□ -1.01
CLK4-207ENST00000520909 NXPE3Q969Y0 559 aa8.75□□□□□ -1.01
CLK4-207ENST00000520909 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
CLK4-207ENST00000520909 HHIPQ96QV1 700 aa8.75□□□□□ -1.01
CLK4-207ENST00000520909 OSMRQ99650 979 aa8.75□□□□□ -1.01
CLK4-207ENST00000520909 A6NHS1 94 aa8.74□□□□□ -1.01
CLK4-207ENST00000520909 SOX1O00570 391 aaPredicted RBP8.74□□□□□ -1.01
CLK4-207ENST00000520909 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
CLK4-207ENST00000520909 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
CLK4-207ENST00000520909 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
CLK4-207ENST00000520909 RNF114Q9Y508 228 aa8.74□□□□□ -1.01
CLK4-207ENST00000520909 RXRBP28702 533 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
CLK4-207ENST00000520909 FZD5Q13467 585 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 ALKBH2Q6NS38 261 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 CHRDQ9H2X0 955 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 CYP4F12Q9HCS2 524 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 SERPINA10Q9UK55 444 aa8.73□□□□□ -1.01
CLK4-207ENST00000520909 AAMPQ13685 434 aa8.72□□□□□ -1.01
CLK4-207ENST00000520909 SMG8Q8ND04 991 aaKnown RBP8.72□□□□□ -1.01
CLK4-207ENST00000520909 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
CLK4-207ENST00000520909 EDN3P14138 238 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 MPSTP25325 297 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 SGO2Q562F6 1265 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.02
CLK4-207ENST00000520909 ZKSCAN3Q9BRR0 538 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 USP26Q9BXU7 913 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 TMPRSS13Q9BYE2 586 aa8.71□□□□□ -1.02
CLK4-207ENST00000520909 ARID1BQ8NFD5 2236 aaPredicted RBP8.7□□□□□ -1.02
CLK4-207ENST00000520909 PHACTR2O75167 634 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
CLK4-207ENST00000520909 USP11P51784 963 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 VN1R5Q7Z5H4 357 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 FBXL6Q8N531 539 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 ASAP3Q8TDY4 903 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 SUGCTQ9HAC7 445 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
CLK4-207ENST00000520909 EREGO14944 169 aa8.69□□□□□ -1.02
CLK4-207ENST00000520909 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
CLK4-207ENST00000520909 EXOSC6Q5RKV6 272 aaKnown RBP8.69□□□□□ -1.02
CLK4-207ENST00000520909 OSBPL1AQ9BXW6 950 aa8.69□□□□□ -1.02
CLK4-207ENST00000520909 SOX17Q9H6I2 414 aaPredicted RBP8.69□□□□□ -1.02
CLK4-207ENST00000520909 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 FAM95CA0A1B0GW59 222 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
CLK4-207ENST00000520909 TNFRSF21O75509 655 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 USP5P45974 858 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 EHHADHQ08426 723 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
CLK4-207ENST00000520909 ANGEL1Q9UNK9 670 aaKnown RBP8.68□□□□□ -1.02
CLK4-207ENST00000520909 TIAF1O95411 115 aa8.67□□□□□ -1.02
CLK4-207ENST00000520909 F13BP05160 661 aa8.67□□□□□ -1.02
CLK4-207ENST00000520909 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLK4-207ENST00000520909 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
CLK4-207ENST00000520909 KRTAP4-9Q9BYQ8 210 aa8.67□□□□□ -1.02
CLK4-207ENST00000520909 ADGRE2Q9UHX3 823 aa8.67□□□□□ -1.02
CLK4-207ENST00000520909 DRD2P14416 443 aa8.66□□□□□ -1.02
CLK4-207ENST00000520909 FOSL1P15407 271 aa8.66□□□□□ -1.02
CLK4-207ENST00000520909 BHLHE41Q9C0J9 482 aaPredicted RBP8.66□□□□□ -1.02
CLK4-207ENST00000520909 DLGAP3O95886 979 aa8.65□□□□□ -1.02
CLK4-207ENST00000520909 ESRRAP11474 423 aaPredicted RBP8.65□□□□□ -1.02
CLK4-207ENST00000520909 GSTM4Q03013 218 aa8.65□□□□□ -1.02
CLK4-207ENST00000520909 FBLIM1Q8WUP2 373 aa8.65□□□□□ -1.02
CLK4-207ENST00000520909 FAM13AO94988 1023 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 SSFA2P28290 1259 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 MTMR3Q13615 1198 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
CLK4-207ENST00000520909 YIPF2Q9BWQ6 316 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
CLK4-207ENST00000520909 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
CLK4-207ENST00000520909 NPR3P17342 541 aa8.63□□□□□ -1.03
CLK4-207ENST00000520909 SOX4Q06945 474 aaPredicted RBP8.63□□□□□ -1.03
CLK4-207ENST00000520909 ABI1Q8IZP0 508 aa8.63□□□□□ -1.03
CLK4-207ENST00000520909 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
CLK4-207ENST00000520909 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
CLK4-207ENST00000520909 PEAR1Q5VY43 1037 aaPredicted RBP8.62□□□□□ -1.03
CLK4-207ENST00000520909 C2CD4AQ8NCU7 369 aaPredicted RBP8.62□□□□□ -1.03
CLK4-207ENST00000520909 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
CLK4-207ENST00000520909 CCDC39Q9UFE4 941 aa8.62□□□□□ -1.03
CLK4-207ENST00000520909 CYP26A1O43174 497 aa8.61□□□□□ -1.03
CLK4-207ENST00000520909 FBXL18Q96ME1 805 aa8.61□□□□□ -1.03
CLK4-207ENST00000520909 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
CLK4-207ENST00000520909 LATS2Q9NRM7 1088 aa8.61□□□□□ -1.03
CLK4-207ENST00000520909 PRNPP04156 253 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms