RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 MAP7D2Q96T17 732 aa8.51□□□□□ -1.05
CTNNA1-225ENST00000520865 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
CTNNA1-225ENST00000520865 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 HNRNPUQ00839 825 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 CCINQ13939 588 aa8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 SALL4Q9UJQ4 1053 aa8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 TRAPPC8Q9Y2L5 1435 aa8.5□□□□□ -1.05
CTNNA1-225ENST00000520865 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 CASKIN1Q8WXD9 1431 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 A0A1W2PP55 124 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 NFKB1P19838 968 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 CD33P20138 364 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 CES1P23141 567 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 ZNF76P36508 570 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 RNF34Q969K3 372 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 PNNQ9H307 717 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 METTL5Q9NRN9 209 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 PREX1Q8TCU6 1659 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 MAP3K1Q13233 1512 aa8.49□□□□□ -1.05
CTNNA1-225ENST00000520865 DISP3Q9P2K9 1392 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 KDM5CP41229 1560 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 SMG6Q86US8 1419 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 ZNF394Q53GI3 561 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 LRRC9Q6ZRR7 1453 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
CTNNA1-225ENST00000520865 ABCA6Q8N139 1617 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 MLH3Q9UHC1 1453 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 LRRIQ1Q96JM4 1722 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 TRPA1O75762 1119 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 RARAP10276 462 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 ITGA6P23229 1130 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 TNNI2P48788 182 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 HNRNPMP52272 730 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 SPEM2Q0P670 501 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 C3orf58Q8NDZ4 430 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 ACBD3Q9H3P7 528 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
CTNNA1-225ENST00000520865 CCDC18Q5T9S5 1454 aa8.46□□□□□ -1.05
CTNNA1-225ENST00000520865 ABCC1P33527 1531 aa8.46□□□□□ -1.05
CTNNA1-225ENST00000520865 TERF1P54274 439 aa8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 NFKBIBQ15653 356 aa8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 MTERF4Q7Z6M4 381 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 TINF2Q9BSI4 451 aa8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.06
CTNNA1-225ENST00000520865 PREX2Q70Z35 1606 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 ZBTB42B2RXF5 422 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 GPR25O00155 361 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 GIPC1O14908 333 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 CTBSQ01459 385 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 BHMTQ93088 406 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 TCF12Q99081 682 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 SRA1Q9HD15 236 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 ISY1Q9ULR0 285 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 SPAG9O60271 1321 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
CTNNA1-225ENST00000520865 H7C1W4 665 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 C2CD2LO14523 706 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 KIF4AO95239 1232 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 ILDR2Q71H61 639 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 ZKSCAN3Q9BRR0 538 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 TGIF2Q9GZN2 237 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 CFDP1Q9UEE9 299 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 PTPRTO14522 1441 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 AGLP35573 1532 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
CTNNA1-225ENST00000520865 C3P01024 1663 aa8.43□□□□□ -1.06
CTNNA1-225ENST00000520865 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms