RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	SUSD4	Q5VX71	490 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	KIAA1211	Q6ZU35	1233 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	C3orf67	Q6ZVT6	689 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	MTERF4	Q7Z6M4	381 aa	Known RBP	10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	NECTIN2	Q92692	538 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	RILPL2	Q969X0	211 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	KIF1BP	Q96EK5	621 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	RBM17	Q96I25	401 aa	Known RBP	10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TSKS	Q9UJT2	592 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	EXOC6B	Q9Y2D4	811 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	UBN2	Q6ZU65	1347 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	RAD50	Q92878	1312 aa		10.32	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ADAMTSL1	Q8N6G6	1762 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	LTBP1	Q14766	1721 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	PPIP5K2	O43314	1243 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZNF500	O60304	480 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ANXA1	P04083	346 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	AOC3	Q16853	763 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	UVSSA	Q2YD98	709 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	HDGFL1	Q5TGJ6	251 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	G2E3	Q7L622	706 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ERC1	Q8IUD2	1116 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	NIM1K	Q8IY84	436 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZGPAT	Q8N5A5	531 aa	Known RBP	10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TMEM87A	Q8NBN3	555 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	SSH3	Q8TE77	659 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	PSMD1	Q99460	953 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TMX4	Q9H1E5	349 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	PRDM10	Q9NQV6	1147 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	WBP1L	Q9NX94	342 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	NOL7	Q9UMY1	257 aa	Known RBP	10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TTC41P	Q6P2S7	1318 aa		10.31	□□□□□ -0.76
CTNNA1-223	ENST00000520520	RASSF10	A6NK89	507 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520		F6X3S4	739 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	HIP1	O00291	1037 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	PTMA	P06454	111 aa	Known RBP	10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	HSPA8	P11142	646 aa	Known RBP	10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	SCNN1D	P51172	638 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	EIF4A1	P60842	406 aa	Known RBP	10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CRY2	Q49AN0	593 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CYP4F22	Q6NT55	531 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	GPT2	Q8TD30	523 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	BEGAIN	Q9BUH8	593 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZNF408	Q9H9D4	720 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZKSCAN5	Q9Y2L8	839 aa		10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	LRRFIP2	Q9Y608	721 aa	Known RBP	10.3	□□□□□ -0.76
CTNNA1-223	ENST00000520520	SYCE3	A1L190	88 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ERVV-1	B6SEH8	477 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	GLRX3	O76003	335 aa	Known RBP	10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	HSPA4	P34932	840 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	MAP2K1	Q02750	393 aa	Predicted RBP	10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	AIMP1	Q12904	312 aa	Known RBP	10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CCDC183	Q5T5S1	534 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	MS4A3	Q96HJ5	214 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CAPNS2	Q96L46	248 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	RBSN	Q9H1K0	784 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TRPC6	Q9Y210	931 aa		10.29	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CCDC85C	A6NKD9	419 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	AOC2	O75106	756 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	NTSR2	O95665	410 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	TPM3	P06753	285 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	CC2D2B	Q6DHV5	1058 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	PPP1R42	Q7Z4L9	355 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ABHD8	Q96I13	439 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZFP91	Q96JP5	570 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	NLRP3	Q96P20	1036 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	DIAPH3	Q9NSV4	1193 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	ZDHHC9	Q9Y397	364 aa		10.28	□□□□□ -0.76
CTNNA1-223	ENST00000520520	SNED1	Q8TER0	1413 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SURF6	O75683	361 aa	Known RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RAD17	O75943	681 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CELF2	O95319	508 aa	Known RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HCLS1	P14317	486 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	KIAA2012	Q0VF49	1180 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	OS9	Q13438	667 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PKP1	Q13835	747 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PROSER3	Q2NL68	480 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ZNF34	Q8IZ26	560 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GPR101	Q96P66	508 aa	Predicted RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	UTP14A	Q9BVJ6	771 aa	Known RBP	10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	TMEM63C	Q9P1W3	806 aa		10.27	□□□□□ -0.77
CTNNA1-223	ENST00000520520	PNMA6E	A0A0J9YXQ4	647 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	SGSM2	O43147	1006 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GALR2	O43603	387 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ALDH1L1	O75891	902 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HOXA10	P31260	410 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	ECE1	P42892	770 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	GMPS	P49915	693 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	UBE2H	P62256	183 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	CST9	Q5W186	159 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	DPP8	Q6V1X1	898 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	USP50	Q70EL3	339 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	HS6ST3	Q8IZP7	471 aa		10.26	□□□□□ -0.77
CTNNA1-223	ENST00000520520	RHPN1	Q8TCX5	695 aa		10.26	□□□□□ -0.77

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