RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ORC1Q13415 861 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 ECM1Q16610 540 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 XP32Q5T750 250 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 USPL1Q5W0Q7 1092 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 WNT8BQ93098 351 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
SKP1-207ENST00000520417 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
SKP1-207ENST00000520417 VN1R5Q7Z5H4 357 aa8.33□□□□□ -1.08
SKP1-207ENST00000520417 RUSC1Q9BVN2 902 aa8.33□□□□□ -1.08
SKP1-207ENST00000520417 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
SKP1-207ENST00000520417 TM4SF5O14894 197 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 GSTM4Q03013 218 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 NIF3L1Q9GZT8 377 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 STOML1Q9UBI4 398 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
SKP1-207ENST00000520417 A0A1W2PP55 124 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
SKP1-207ENST00000520417 CPNE3O75131 537 aaKnown RBP8.31□□□□□ -1.08
SKP1-207ENST00000520417 FSTP19883 344 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 Q6ZS46 218 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 GALNT12Q8IXK2 581 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 BHLHE41Q9C0J9 482 aaPredicted RBP8.31□□□□□ -1.08
SKP1-207ENST00000520417 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 EHD4Q9H223 541 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 KCNF1Q9H3M0 494 aa8.31□□□□□ -1.08
SKP1-207ENST00000520417 A0A096LPE4 126 aa8.3□□□□□ -1.08
SKP1-207ENST00000520417 A0A1W2PPZ6 126 aa8.3□□□□□ -1.08
SKP1-207ENST00000520417 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
SKP1-207ENST00000520417 NPHS2Q9NP85 383 aa8.3□□□□□ -1.08
SKP1-207ENST00000520417 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
SKP1-207ENST00000520417 GAS2O43903 313 aaKnown RBP8.29□□□□□ -1.08
SKP1-207ENST00000520417 GADD45BO75293 160 aaPredicted RBP8.29□□□□□ -1.08
SKP1-207ENST00000520417 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
SKP1-207ENST00000520417 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
SKP1-207ENST00000520417 ARMC10Q8N2F6 343 aa8.29□□□□□ -1.08
SKP1-207ENST00000520417 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
SKP1-207ENST00000520417 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
SKP1-207ENST00000520417 GPR182O15218 404 aa8.28□□□□□ -1.08
SKP1-207ENST00000520417 GRIA4P48058 902 aa8.28□□□□□ -1.08
SKP1-207ENST00000520417 ANKRD34AQ69YU3 496 aa8.28□□□□□ -1.08
SKP1-207ENST00000520417 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
SKP1-207ENST00000520417 ZFP64Q9NPA5 681 aa8.28□□□□□ -1.08
SKP1-207ENST00000520417 EIF1AYO14602 144 aaKnown RBP8.27□□□□□ -1.09
SKP1-207ENST00000520417 BRD1O95696 1058 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 BMP3P12645 472 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 PREPP48147 710 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 CCNJLQ8IV13 435 aa8.27□□□□□ -1.09
SKP1-207ENST00000520417 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
SKP1-207ENST00000520417 RXRBP28702 533 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 ARTNQ5T4W7 220 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 TRIM42Q8IWZ5 723 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 CCDC74AQ96AQ1 378 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 DMRTB1Q96MA1 342 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 TCF12Q99081 682 aa8.26□□□□□ -1.09
SKP1-207ENST00000520417 CLEC4MQ9H2X3 399 aaPredicted RBP8.26□□□□□ -1.09
SKP1-207ENST00000520417 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
SKP1-207ENST00000520417 HMX2A2RU54 273 aa8.25□□□□□ -1.09
SKP1-207ENST00000520417 MAPK1P28482 360 aa8.25□□□□□ -1.09
SKP1-207ENST00000520417 CYP4F12Q9HCS2 524 aa8.25□□□□□ -1.09
SKP1-207ENST00000520417 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 ZNF423Q2M1K9 1284 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 KIAA0319Q5VV43 1072 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 BEND4Q6ZU67 534 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 SOX17Q9H6I2 414 aaPredicted RBP8.24□□□□□ -1.09
SKP1-207ENST00000520417 C7orf69Q9H7B7 122 aa8.24□□□□□ -1.09
SKP1-207ENST00000520417 GSC2O15499 205 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 DLGAP3O95886 979 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 DRD2P14416 443 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 SSTR4P31391 388 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 LRP8Q14114 963 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 FAM20CQ8IXL6 584 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
SKP1-207ENST00000520417 EPS8L3Q8TE67 593 aaKnown RBP8.23□□□□□ -1.09
SKP1-207ENST00000520417 RBCK1Q9BYM8 510 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 DNAJC25Q9H1X3 360 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 RNF112Q9ULX5 631 aa8.23□□□□□ -1.09
SKP1-207ENST00000520417 MEGF11A6BM72 1044 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 HYAL3O43820 417 aaPredicted RBP8.22□□□□□ -1.09
SKP1-207ENST00000520417 MAOBP27338 520 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 USP11P51784 963 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 ZNF157P51786 506 aaPredicted RBP8.22□□□□□ -1.09
SKP1-207ENST00000520417 POU4F3Q15319 338 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 SGO2Q562F6 1265 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 EXOSC6Q5RKV6 272 aaKnown RBP8.22□□□□□ -1.09
SKP1-207ENST00000520417 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
SKP1-207ENST00000520417 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
SKP1-207ENST00000520417 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
SKP1-207ENST00000520417 CYP11A1P05108 521 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 NFIAQ12857 509 aa8.21□□□□□ -1.1
SKP1-207ENST00000520417 CLEC10AQ8IUN9 316 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms