RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 C8orf34Q49A92 452 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 ESR2Q92731 530 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 TESK2Q96S53 571 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 YTHDC2Q9H6S0 1430 aaKnown RBP13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 BMP15O95972 392 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 ZNF165P49910 485 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.21
ERGIC1-208ENST00000520399 UHRF1BP1Q6BDS2 1440 aa13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 VAMP4O75379 141 aa13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 RTN1Q16799 776 aa13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.22
ERGIC1-208ENST00000520399 SYKP43405 635 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 EXOC1Q9NV70 894 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 SMC6Q96SB8 1091 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 UBA7P41226 1012 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 ODF2LQ9ULJ1 636 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 PZPP20742 1482 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 RLBP1P12271 317 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 SH2D4BQ5SQS7 431 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
ERGIC1-208ENST00000520399 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 F13A1P00488 732 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 IL2RBP14784 551 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 ISM2Q6H9L7 571 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 ACSBG1Q96GR2 724 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 ICE2Q659A1 982 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 RTL9Q8NET4 1388 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 HOXC9P31274 260 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 TSPYL6Q8N831 410 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 LINS1Q8NG48 757 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
ERGIC1-208ENST00000520399 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 DNA2P51530 1060 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 KIF5AQ12840 1032 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 MPHOSPH6Q99547 160 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 TNNQ9UQP3 1299 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 IDEP14735 1019 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 GNAT2P19087 354 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 TUBB4BP68371 445 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 CKAP4Q07065 602 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 RNMTO43148 476 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 GMNNO75496 209 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 IFI16Q16666 785 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 SLC9C2Q5TAH2 1124 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 RRAGBQ5VZM2 374 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
ERGIC1-208ENST00000520399 HSF2BPO75031 334 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 MRPS27Q92552 414 aaKnown RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 HMGB1P1B2RPK0 211 aaPredicted RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 PRC1O43663 620 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 MYO1BO43795 1136 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 SNX16P57768 344 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 STAT6P42226 847 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 TFCP2Q12800 502 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 B4GALNT4Q76KP1 1039 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 ERMNQ8TAM6 284 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 JRKLQ9Y4A0 524 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 SIRT1Q96EB6 747 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 EYA1Q99502 592 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 TTC12Q9H892 705 aaPredicted RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 FEZ2Q9UHY8 353 aaPredicted RBP13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 ATP7AQ04656 1500 aa13.67□□□□□ -0.22
ERGIC1-208ENST00000520399 GNAQP50148 359 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 LMNTD2Q8IXW0 634 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
ERGIC1-208ENST00000520399 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms