RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 TBC1D10BQ4KMP7 808 aaPredicted RBP21.22■□□□□ 0.99
CLK4-204ENST00000520126 SAMD7Q7Z3H4 446 aa21.22■□□□□ 0.99
CLK4-204ENST00000520126 SIRT2Q8IXJ6 389 aa21.22■□□□□ 0.99
CLK4-204ENST00000520126 AGBL3Q8NEM8 1001 aa21.22■□□□□ 0.99
CLK4-204ENST00000520126 DPF2Q92785 391 aa21.22■□□□□ 0.99
CLK4-204ENST00000520126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
CLK4-204ENST00000520126 C1QTNF8P60827 252 aa21.21■□□□□ 0.99
CLK4-204ENST00000520126 KIAA0825Q8IV33 1275 aa21.21■□□□□ 0.99
CLK4-204ENST00000520126 TDRD7Q8NHU6 1098 aaKnown RBP21.21■□□□□ 0.99
CLK4-204ENST00000520126 GNL3LQ9NVN8 582 aaKnown RBP21.21■□□□□ 0.99
CLK4-204ENST00000520126 USP17L8P0C7I0 530 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 HSP90AB4PQ58FF6 505 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 OGFOD1Q8N543 542 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 SMC1BQ8NDV3 1235 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 RBM46Q8TBY0 533 aaKnown RBP21.2■□□□□ 0.98
CLK4-204ENST00000520126 XAGE2Q96GT9 111 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 NOP58Q9Y2X3 529 aaKnown RBP21.2■□□□□ 0.98
CLK4-204ENST00000520126 SCN4AP35499 1836 aa21.2■□□□□ 0.98
CLK4-204ENST00000520126 PHKA1P46020 1223 aa21.19■□□□□ 0.98
CLK4-204ENST00000520126 USP50Q70EL3 339 aaPredicted RBP21.19■□□□□ 0.98
CLK4-204ENST00000520126 LDHDQ86WU2 507 aa21.19■□□□□ 0.98
CLK4-204ENST00000520126 ERC1Q8IUD2 1116 aa21.19■□□□□ 0.98
CLK4-204ENST00000520126 TRPM4Q8TD43 1214 aa21.19■□□□□ 0.98
CLK4-204ENST00000520126 MYO3BQ8WXR4 1341 aa21.19■□□□□ 0.98
CLK4-204ENST00000520126 MFSD14BQ5SR56 506 aa21.18■□□□□ 0.98
CLK4-204ENST00000520126 CHADLQ6NUI6 762 aa21.18■□□□□ 0.98
CLK4-204ENST00000520126 HDAC9Q9UKV0 1011 aa21.18■□□□□ 0.98
CLK4-204ENST00000520126 KIF4BQ2VIQ3 1234 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 TNNI3KQ59H18 835 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 MAP1SQ66K74 1059 aaPredicted RBP21.17■□□□□ 0.98
CLK4-204ENST00000520126 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 EXOC6Q8TAG9 804 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
CLK4-204ENST00000520126 IL1RAPL2Q9NP60 686 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 FPGT-TNNI3KV9GXZ4 949 aa21.17■□□□□ 0.98
CLK4-204ENST00000520126 CERS5Q8N5B7 392 aa21.16■□□□□ 0.98
CLK4-204ENST00000520126 GMLQ99445 158 aa21.16■□□□□ 0.98
CLK4-204ENST00000520126 PCDHB15Q9Y5E8 787 aa21.16■□□□□ 0.98
CLK4-204ENST00000520126 EGFRP00533 1210 aa21.15■□□□□ 0.98
CLK4-204ENST00000520126 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLK4-204ENST00000520126 RHPN1Q8TCX5 695 aa21.15■□□□□ 0.98
CLK4-204ENST00000520126 MYOZ2Q9NPC6 264 aa21.15■□□□□ 0.98
CLK4-204ENST00000520126 FAM205AQ6ZU69 1335 aa21.15■□□□□ 0.98
CLK4-204ENST00000520126 ZNF609O15014 1411 aa21.15■□□□□ 0.98
CLK4-204ENST00000520126 HIRAP54198 1017 aaPredicted RBP21.14■□□□□ 0.97
CLK4-204ENST00000520126 FSTL1Q12841 308 aa21.14■□□□□ 0.97
CLK4-204ENST00000520126 TTC39AQ5SRH9 613 aa21.14■□□□□ 0.97
CLK4-204ENST00000520126 AACSQ86V21 672 aa21.14■□□□□ 0.97
CLK4-204ENST00000520126 KIF1BPQ96EK5 621 aa21.14■□□□□ 0.97
CLK4-204ENST00000520126 DBNDD2Q9BQY9 259 aa21.14■□□□□ 0.97
CLK4-204ENST00000520126 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 CCDC158Q5M9N0 1113 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 CNTROBQ8N137 903 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 TBC1D22AQ8WUA7 517 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 DENND2AQ9ULE3 1009 aa21.13■□□□□ 0.97
CLK4-204ENST00000520126 TTF2Q9UNY4 1162 aaKnown RBP21.13■□□□□ 0.97
CLK4-204ENST00000520126 ZNF280AP59817 542 aaPredicted RBP21.12■□□□□ 0.97
CLK4-204ENST00000520126 SCARF1Q14162 830 aa21.12■□□□□ 0.97
CLK4-204ENST00000520126 CLASRPQ8N2M8 674 aaKnown RBP21.12■□□□□ 0.97
CLK4-204ENST00000520126 EAF2Q96CJ1 260 aaPredicted RBP21.12■□□□□ 0.97
CLK4-204ENST00000520126 PSME4Q14997 1843 aa21.12■□□□□ 0.97
CLK4-204ENST00000520126 FKBP1AP62942 108 aaKnown RBP21.11■□□□□ 0.97
CLK4-204ENST00000520126 WDR66Q8TBY9 1149 aa21.11■□□□□ 0.97
CLK4-204ENST00000520126 SMARCA5O60264 1052 aaPredicted RBP21.1■□□□□ 0.97
CLK4-204ENST00000520126 IFIT2P09913 472 aaKnown RBP21.1■□□□□ 0.97
CLK4-204ENST00000520126 DLGAP5Q15398 846 aa21.1■□□□□ 0.97
CLK4-204ENST00000520126 GRIK5Q16478 980 aa21.1■□□□□ 0.97
CLK4-204ENST00000520126 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
CLK4-204ENST00000520126 TLR7Q9NYK1 1049 aaKnown RBP21.1■□□□□ 0.97
CLK4-204ENST00000520126 ABCF2Q9UG63 623 aa21.1■□□□□ 0.97
CLK4-204ENST00000520126 ASTN2O75129 1339 aaPredicted RBP21.09■□□□□ 0.97
CLK4-204ENST00000520126 SEMA3EO15041 775 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 UQCRFS1P1P0C7P4 283 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 RASGRF1Q13972 1273 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 NBPF9Q3BBW0 867 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 CFAP100Q494V2 611 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 LRRCC1Q9C099 1032 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 SNRKQ9NRH2 765 aa21.09■□□□□ 0.97
CLK4-204ENST00000520126 C1QBPQ07021 282 aaKnown RBP21.08■□□□□ 0.97
CLK4-204ENST00000520126 ANGEL2Q5VTE6 544 aaKnown RBP21.08■□□□□ 0.97
CLK4-204ENST00000520126 USP48Q86UV5 1035 aa21.08■□□□□ 0.97
CLK4-204ENST00000520126 GGA3Q9NZ52 723 aa21.08■□□□□ 0.97
CLK4-204ENST00000520126 DBNLQ9UJU6 430 aaKnown RBP21.08■□□□□ 0.97
CLK4-204ENST00000520126 SCAF8Q9UPN6 1271 aaKnown RBP21.08■□□□□ 0.97
CLK4-204ENST00000520126 PCDHAC2Q9Y5I4 1007 aa21.08■□□□□ 0.97
CLK4-204ENST00000520126 LDHBP07195 334 aaKnown RBP21.07■□□□□ 0.96
CLK4-204ENST00000520126 PI16Q6UXB8 463 aa21.07■□□□□ 0.96
CLK4-204ENST00000520126 SPATA5Q8NB90 893 aa21.07■□□□□ 0.96
CLK4-204ENST00000520126 ZC3H15Q8WU90 426 aaKnown RBP21.07■□□□□ 0.96
CLK4-204ENST00000520126 GLIS2Q9BZE0 524 aaPredicted RBP21.07■□□□□ 0.96
CLK4-204ENST00000520126 ZNF408Q9H9D4 720 aa21.07■□□□□ 0.96
CLK4-204ENST00000520126 ZBTB47Q9UFB7 747 aaPredicted RBP21.07■□□□□ 0.96
CLK4-204ENST00000520126 TRAF5O00463 557 aa21.06■□□□□ 0.96
CLK4-204ENST00000520126 WNT10BO00744 389 aa21.06■□□□□ 0.96
CLK4-204ENST00000520126 KRT26Q7Z3Y9 468 aa21.06■□□□□ 0.96
CLK4-204ENST00000520126 DCTPP1Q9H773 170 aa21.06■□□□□ 0.96
CLK4-204ENST00000520126 HMG20BQ9P0W2 317 aa21.06■□□□□ 0.96
CLK4-204ENST00000520126 COL1A1P02452 1464 aaPredicted RBP21.06■□□□□ 0.96
CLK4-204ENST00000520126 HSPA6P17066 643 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms