RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 DOCK2Q92608 1830 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 ZNF213O14771 459 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 PFKFB2O60825 505 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 PDE6AP16499 860 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 NASPP49321 788 aaPredicted RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 UBE2HP62256 183 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 MAP3K12Q12852 859 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 ZNF532Q9HCE3 1301 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 DTNBO60941 627 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 GADD45BO75293 160 aaPredicted RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 FGAP02671 866 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 HAND2P61296 217 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 KRT85P78386 507 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 DNM1Q05193 864 aaKnown RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 APOBRQ0VD83 1088 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 LRSAM1Q6UWE0 723 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 CDC37L1Q7L3B6 337 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 NYXQ9GZU5 481 aa9.95□□□□□ -0.82
HMGB4-203ENST00000519684 MYO5AQ9Y4I1 1855 aaKnown RBP9.95□□□□□ -0.82
HMGB4-203ENST00000519684 A0A0G2JLW4 131 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 SYCE3A1L190 88 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 H3BQV1 296 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 ZPR1O75312 459 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 RPS6KA4O75676 772 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 APPP05067 770 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 KCNQ4P56696 695 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 HMGN5P82970 282 aaKnown RBP9.94□□□□□ -0.82
HMGB4-203ENST00000519684 CHRNDQ07001 517 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 SCRN1Q12765 414 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 TRDNQ13061 729 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 IFFO2Q5TF58 517 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 BICDL1Q6ZP65 573 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 NCOA7Q8NI08 942 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 AIDAQ96BJ3 306 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 AGXT2Q9BYV1 514 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 CCNL1Q9UK58 526 aaPredicted RBP9.94□□□□□ -0.82
HMGB4-203ENST00000519684 GNPATO15228 680 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 JAK2O60674 1132 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 MCM5P33992 734 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 RASGRF1Q13972 1273 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 ZNF274Q96GC6 653 aaPredicted RBP9.94□□□□□ -0.82
HMGB4-203ENST00000519684 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
HMGB4-203ENST00000519684 A0A1B0GUL6 1792 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 FOXP2O15409 715 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 LETM1O95202 739 aaPredicted RBP9.93□□□□□ -0.82
HMGB4-203ENST00000519684 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
HMGB4-203ENST00000519684 CCDC183Q5T5S1 534 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 FERMT3Q86UX7 667 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 DDX11Q96FC9 970 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 GNL3LQ9NVN8 582 aaKnown RBP9.93□□□□□ -0.82
HMGB4-203ENST00000519684 WWC3Q9ULE0 1092 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
HMGB4-203ENST00000519684 WDR19Q8NEZ3 1342 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 COL24A1Q17RW2 1714 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 PRC1O43663 620 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 TBC1D9BQ66K14 1250 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 CHST3Q7LGC8 479 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 FBXL16Q8N461 479 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 MAGEB6Q8N7X4 407 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 SMARCC2Q8TAQ2 1214 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
HMGB4-203ENST00000519684 LY75O60449 1722 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 TCRBV5S4A2TA0A5A2 114 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 PTPDC1A2A3K4 754 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 SNAP23O00161 211 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 BCAMP50895 628 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 CCT2P78371 535 aaKnown RBP9.92□□□□□ -0.82
HMGB4-203ENST00000519684 CCDC173Q0VFZ6 552 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 PTF1AQ7RTS3 328 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 NBPF5PQ86XG9 351 aaPredicted RBP9.92□□□□□ -0.82
HMGB4-203ENST00000519684 NSUN7Q8NE18 718 aaKnown RBP9.92□□□□□ -0.82
HMGB4-203ENST00000519684 TSPY26PQ9H489 355 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 ZSCAN16Q9H4T2 348 aaPredicted RBP9.92□□□□□ -0.82
HMGB4-203ENST00000519684 TAF1LQ8IZX4 1826 aa9.92□□□□□ -0.82
HMGB4-203ENST00000519684 DHX16O60231 1041 aaKnown RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 PDIA3P30101 505 aaKnown RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 SLC10A5Q5PT55 438 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 MB21D2Q8IYB1 491 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 SCAND2PQ9GZW5 306 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 BSDC1Q9NW68 430 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 ZMYM6O95789 1325 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 NPHP1O15259 732 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 MBD4O95243 580 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 GNAT2P19087 354 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 UBE4AQ14139 1066 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 NAA16Q6N069 864 aaPredicted RBP9.91□□□□□ -0.82
HMGB4-203ENST00000519684 VPS37DQ86XT2 251 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
HMGB4-203ENST00000519684 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms