RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 TRPM4Q8TD43 1214 aa14.28□□□□□ -0.12
SPIDR-212ENST00000519661 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
SPIDR-212ENST00000519661 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-212ENST00000519661 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
SPIDR-212ENST00000519661 SIL1Q9H173 461 aa14.28□□□□□ -0.12
SPIDR-212ENST00000519661 COL1A1P02452 1464 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-212ENST00000519661 SHTN1A0MZ66 631 aa14.27□□□□□ -0.13
SPIDR-212ENST00000519661 EGFRP00533 1210 aa14.27□□□□□ -0.13
SPIDR-212ENST00000519661 GTF2IP78347 998 aa14.27□□□□□ -0.13
SPIDR-212ENST00000519661 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.13
SPIDR-212ENST00000519661 TFCP2Q12800 502 aa14.27□□□□□ -0.13
SPIDR-212ENST00000519661 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
SPIDR-212ENST00000519661 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.13
SPIDR-212ENST00000519661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
SPIDR-212ENST00000519661 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 HMMRO75330 724 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 BCAMP50895 628 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
SPIDR-212ENST00000519661 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 MYOZ2Q9NPC6 264 aa14.26□□□□□ -0.13
SPIDR-212ENST00000519661 ARID4AP29374 1257 aaPredicted RBP14.25□□□□□ -0.13
SPIDR-212ENST00000519661 APLP1P51693 650 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 KIF4BQ2VIQ3 1234 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 CCDC102BQ68D86 513 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 CNTROBQ8N137 903 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 OGFOD1Q8N543 542 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 SERPINA10Q9UK55 444 aa14.25□□□□□ -0.13
SPIDR-212ENST00000519661 SURF6O75683 361 aaKnown RBP14.24□□□□□ -0.13
SPIDR-212ENST00000519661 TNNI3KQ59H18 835 aa14.24□□□□□ -0.13
SPIDR-212ENST00000519661 MFSD14BQ5SR56 506 aa14.24□□□□□ -0.13
SPIDR-212ENST00000519661 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
SPIDR-212ENST00000519661 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
SPIDR-212ENST00000519661 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
SPIDR-212ENST00000519661 FPGT-TNNI3KV9GXZ4 949 aa14.24□□□□□ -0.13
SPIDR-212ENST00000519661 WNT10BO00744 389 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 RAB11FIP3O75154 756 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 PHKA1P46020 1223 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 TIMM10P62072 90 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 EAPPQ56P03 285 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-212ENST00000519661 CDC37L1Q7L3B6 337 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 VPS37DQ86XT2 251 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 HDAC9Q9UKV0 1011 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
SPIDR-212ENST00000519661 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
SPIDR-212ENST00000519661 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
SPIDR-212ENST00000519661 ADORA1P30542 326 aa14.22□□□□□ -0.13
SPIDR-212ENST00000519661 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
SPIDR-212ENST00000519661 TBC1D10BQ4KMP7 808 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-212ENST00000519661 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-212ENST00000519661 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
SPIDR-212ENST00000519661 MAST3O60307 1309 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 KIAA0825Q8IV33 1275 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 DNAJC5GQ8N7S2 189 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 RHPN1Q8TCX5 695 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.13
SPIDR-212ENST00000519661 KIF1BPQ96EK5 621 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
SPIDR-212ENST00000519661 SCARF1Q14162 830 aa14.2□□□□□ -0.14
SPIDR-212ENST00000519661 TMED8Q6PL24 325 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-212ENST00000519661 ZGPATQ8N5A5 531 aaKnown RBP14.2□□□□□ -0.14
SPIDR-212ENST00000519661 FAM163AQ96GL9 167 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-212ENST00000519661 HHIPL1Q96JK4 782 aa14.2□□□□□ -0.14
SPIDR-212ENST00000519661 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
SPIDR-212ENST00000519661 DBNLQ9UJU6 430 aaKnown RBP14.2□□□□□ -0.14
SPIDR-212ENST00000519661 UQCRFS1P1P0C7P4 283 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 GRIK5Q16478 980 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 FKBP1CQ5VVH2 108 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 GGA3Q9NZ52 723 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 EXOC6BQ9Y2D4 811 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 PCDHB15Q9Y5E8 787 aa14.19□□□□□ -0.14
SPIDR-212ENST00000519661 GAKO14976 1311 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 HDAC1Q13547 482 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-212ENST00000519661 CST9Q5W186 159 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 KRT26Q7Z3Y9 468 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.18□□□□□ -0.14
SPIDR-212ENST00000519661 DCPSQ96C86 337 aaKnown RBP14.18□□□□□ -0.14
SPIDR-212ENST00000519661 HMG20BQ9P0W2 317 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 TTF2Q9UNY4 1162 aaKnown RBP14.18□□□□□ -0.14
SPIDR-212ENST00000519661 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 PPP2R3BQ9Y5P8 575 aa14.18□□□□□ -0.14
SPIDR-212ENST00000519661 ASTN2O75129 1339 aaPredicted RBP14.17□□□□□ -0.14
SPIDR-212ENST00000519661 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 MCAMP43121 646 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 FKBP1BP68106 108 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 DLGAP5Q15398 846 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 CFAP100Q494V2 611 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 SPDYE2Q495Y8 402 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 ANGEL2Q5VTE6 544 aaKnown RBP14.17□□□□□ -0.14
SPIDR-212ENST00000519661 APOBEC3FQ8IUX4 373 aaKnown RBP14.17□□□□□ -0.14
SPIDR-212ENST00000519661 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
SPIDR-212ENST00000519661 DBNDD2Q9BQY9 259 aa14.17□□□□□ -0.14
SPIDR-212ENST00000519661 GLIS2Q9BZE0 524 aaPredicted RBP14.17□□□□□ -0.14
SPIDR-212ENST00000519661 IQSEC3Q9UPP2 1182 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms