RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 RPS12P25398 132 aaKnown RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 GTF2IP78347 998 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 ATP8B2P98198 1209 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 FSTL1Q12841 308 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 PUM3Q15397 648 aaKnown RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 SAMD7Q7Z3H4 446 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 PNMA8AQ86V59 439 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 ADARB2Q9NS39 739 aaKnown RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 CEP126Q9P2H0 1117 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-206ENST00000519115 ZNF609O15014 1411 aa9.36□□□□□ -0.91
SDCBP-206ENST00000519115 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 H7C1D1 291 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 IGHDP01880 384 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 SLC5A1P13866 664 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 FGFR2P21802 821 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 HIBADHP31937 336 aaKnown RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 IL15P40933 162 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 TBC1D10BQ4KMP7 808 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 DACT2Q5SW24 774 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 TTLL5Q6EMB2 1281 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 DPF2Q92785 391 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 FAM84BQ96KN1 310 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 GMLQ99445 158 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
SDCBP-206ENST00000519115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-206ENST00000519115 IL1R1P14778 569 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 HSPA6P17066 643 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 ADORA1P30542 326 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 BCAMP50895 628 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 HIRAP54198 1017 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-206ENST00000519115 TFCP2Q12800 502 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-206ENST00000519115 OS9Q13438 667 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-206ENST00000519115 KIF4BQ2VIQ3 1234 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 CEP85Q6P2H3 762 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 USP50Q70EL3 339 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-206ENST00000519115 FBXO33Q7Z6M2 555 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 AGBL3Q8NEM8 1001 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
SDCBP-206ENST00000519115 COL1A1P02452 1464 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-206ENST00000519115 F8W031 263 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 SURF6O75683 361 aaKnown RBP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 USP17L8P0C7I0 530 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 HTRA3P83110 453 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 NUCB1Q02818 461 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 G3BP1Q13283 466 aaKnown RBP eCLIP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 CAVIN4Q5BKX8 364 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 SIRT2Q8IXJ6 389 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 TDRD7Q8NHU6 1098 aaKnown RBP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 LPIN2Q92539 896 aa9.33□□□□□ -0.92
SDCBP-206ENST00000519115 MYO5AQ9Y4I1 1855 aaKnown RBP9.33□□□□□ -0.92
SDCBP-206ENST00000519115 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 MYO3BQ8WXR4 1341 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 FRAT2O75474 233 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 SASH1O94885 1247 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 PHKA1P46020 1223 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 ZNF280AP59817 542 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 TIMM10P62072 90 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 MFSD14BQ5SR56 506 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 GLIS2Q9BZE0 524 aaPredicted RBP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 EXOC6BQ9Y2D4 811 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
SDCBP-206ENST00000519115 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
SDCBP-206ENST00000519115 FAM205AQ6ZU69 1335 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 AKAP11Q9UKA4 1901 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 CEP350Q5VT06 3117 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 A0A1B0GUL7 405 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 TRAF5O00463 557 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 ITGBL1O95965 494 aaPredicted RBP9.31□□□□□ -0.92
SDCBP-206ENST00000519115 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 NEUROD6Q96NK8 337 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 MYOZ2Q9NPC6 264 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 GGA3Q9NZ52 723 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 PCDHAC2Q9Y5I4 1007 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
SDCBP-206ENST00000519115 APBB1O00213 710 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 APLP1P51693 650 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 SCARF1Q14162 830 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 GRIK5Q16478 980 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 NBPF9Q3BBW0 867 aa9.3□□□□□ -0.92
SDCBP-206ENST00000519115 DLK2Q6UY11 383 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms