RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 MYH3P11055 1940 aa15.85■□□□□ 0.13
TRAPPC9-204ENST00000518723 IRS2Q9Y4H2 1338 aa15.85■□□□□ 0.13
TRAPPC9-204ENST00000518723 TESPA1A2RU30 521 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 CSF1RP07333 972 aa15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 CRHR2Q13324 411 aa15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 RBBP6Q7Z6E9 1792 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 SPEF2Q9C093 1822 aa15.84■□□□□ 0.13
TRAPPC9-204ENST00000518723 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 MYO1BO43795 1136 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 GJA5P36382 358 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 KCNJ4P48050 445 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 IREB2P48200 963 aaKnown RBP15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 FKBP1AP62942 108 aaKnown RBP15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 CHRNDQ07001 517 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 EFCC1Q9HA90 598 aa15.83■□□□□ 0.12
TRAPPC9-204ENST00000518723 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 CASP7P55210 303 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 SP3Q02447 781 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 GCKRQ14397 625 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 CFAP100Q494V2 611 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 PTPN18Q99952 460 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 STK31Q9BXU1 1019 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 PCDHAC2Q9Y5I4 1007 aa15.82■□□□□ 0.12
TRAPPC9-204ENST00000518723 CLRN2A0PK11 232 aa15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 USP2O75604 605 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 IL1R1P14778 569 aa15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 NBPF12Q5TAG4 269 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 ANKRD13AQ8IZ07 590 aa15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 PRMT6Q96LA8 375 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-204ENST00000518723 CAP1Q01518 475 aa15.8■□□□□ 0.12
TRAPPC9-204ENST00000518723 ZNF333Q96JL9 665 aa15.8■□□□□ 0.12
TRAPPC9-204ENST00000518723 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC9-204ENST00000518723 SNAP23O00161 211 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 DDX10Q13206 875 aaKnown RBP15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 RASA3Q14644 834 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 G2E3Q7L622 706 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 ZNF804AQ7Z570 1209 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 MYH16Q9H6N6 1097 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 VEZTQ9HBM0 779 aa15.79■□□□□ 0.12
TRAPPC9-204ENST00000518723 CEP290O15078 2479 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 ECM29Q5VYK3 1845 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 AOX1Q06278 1338 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 F8W031 263 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 OPTNQ96CV9 577 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 MS4A4AQ96JQ5 239 aa15.78■□□□□ 0.12
TRAPPC9-204ENST00000518723 TAF5LO75529 589 aa15.77■□□□□ 0.12
TRAPPC9-204ENST00000518723 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
TRAPPC9-204ENST00000518723 TNFAIP1Q13829 316 aa15.77■□□□□ 0.12
TRAPPC9-204ENST00000518723 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
TRAPPC9-204ENST00000518723 FLIIQ13045 1269 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 NBPF11Q86T75 865 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 HELBQ8NG08 1087 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 BRI3BPQ8WY22 251 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 ELP3Q9H9T3 547 aa15.76■□□□□ 0.11
TRAPPC9-204ENST00000518723 FAM205AQ6ZU69 1335 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 IFIT5Q13325 482 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 SLC9C1Q4G0N8 1177 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 TEPSINQ96N21 525 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 ZNF70Q9UC06 446 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 SERPINA10Q9UK55 444 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 COLQQ9Y215 455 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
TRAPPC9-204ENST00000518723 TRIOBPQ9H2D6 2365 aa15.74■□□□□ 0.11
TRAPPC9-204ENST00000518723 GTF2A2P52657 109 aa15.74■□□□□ 0.11
TRAPPC9-204ENST00000518723 FOXO4P98177 505 aa15.74■□□□□ 0.11
TRAPPC9-204ENST00000518723 TAF1CQ15572 869 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC9-204ENST00000518723 RANBP2P49792 3224 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 FKBP5Q13451 457 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 VGLL4Q14135 290 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 CCL15Q16663 113 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 SZT2Q5T011 3432 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 OTOFQ9HC10 1997 aa15.73■□□□□ 0.11
TRAPPC9-204ENST00000518723 MAP3K9P80192 1104 aa15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 MFSD14BQ5SR56 506 aa15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 FAM43AQ8N2R8 423 aa15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 ZCCHC17Q9NP64 241 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-204ENST00000518723 A0A1B0GUL6 1792 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms