RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OSBPL7Q9BZF2 842 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 ABCB6Q9NP58 842 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
VPS13B-207ENST00000518569 FAM8A1Q9UBU6 413 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 A0A096LPE4 126 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 A0A1W2PPZ6 126 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 SPDYE3A6NKU9 549 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 SORBS3O60504 671 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 GSTT1P30711 240 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 GRIA4P48058 902 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 GDF6Q6KF10 455 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-207ENST00000518569 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 SRA1Q9HD15 236 aaKnown RBP6.32□□□□□ -1.4
VPS13B-207ENST00000518569 PPME1Q9Y570 386 aa6.32□□□□□ -1.4
VPS13B-207ENST00000518569 FURINP09958 794 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 VAMP1P23763 118 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 CABP4P57796 275 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
VPS13B-207ENST00000518569 RPS26P11Q5JNZ5 115 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-207ENST00000518569 ADAMTSL4Q6UY14 1074 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 MAP4K3Q8IVH8 894 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 IL22RA1Q8N6P7 574 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 ASAP3Q8TDY4 903 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 WNT8BQ93098 351 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 LACRTQ9GZZ8 138 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 RNF19AQ9NV58 838 aa6.31□□□□□ -1.4
VPS13B-207ENST00000518569 METTL12A8MUP2 240 aa6.3□□□□□ -1.4
VPS13B-207ENST00000518569 H3BRJ5 948 aa6.3□□□□□ -1.4
VPS13B-207ENST00000518569 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-207ENST00000518569 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
VPS13B-207ENST00000518569 TRIM11Q96F44 468 aa6.3□□□□□ -1.4
VPS13B-207ENST00000518569 CLEC4MQ9H2X3 399 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-207ENST00000518569 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
VPS13B-207ENST00000518569 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 EPHA1P21709 976 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 FCGRTP55899 365 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 SPRED3Q2MJR0 410 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 DTHD1Q6ZMT9 781 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-207ENST00000518569 C3orf58Q8NDZ4 430 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 ZNF576Q9H609 170 aa6.29□□□□□ -1.4
VPS13B-207ENST00000518569 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-207ENST00000518569 SH2B1Q9NRF2 756 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-207ENST00000518569 C1QTNF9BB2RNN3 333 aa6.28□□□□□ -1.4
VPS13B-207ENST00000518569 PIP4K2BP78356 416 aa6.28□□□□□ -1.4
VPS13B-207ENST00000518569 TRAPPC3LQ5T215 181 aa6.28□□□□□ -1.4
VPS13B-207ENST00000518569 FAM161BQ96MY7 647 aa6.28□□□□□ -1.4
VPS13B-207ENST00000518569 OSGEPQ9NPF4 335 aa6.28□□□□□ -1.4
VPS13B-207ENST00000518569 A0A0A0MRY4 1105 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 B3GALT4O96024 378 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-207ENST00000518569 ARL4DP49703 201 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 ST13P50502 369 aaKnown RBP6.27□□□□□ -1.41
VPS13B-207ENST00000518569 RAC1P63000 192 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 PCDH1Q08174 1060 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 IKBKEQ14164 716 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 XP32Q5T750 250 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 FBXO11Q86XK2 927 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 MRRFQ96E11 262 aaKnown RBP6.27□□□□□ -1.41
VPS13B-207ENST00000518569 CRELD1Q96HD1 420 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 VTI1BQ9UEU0 232 aa6.27□□□□□ -1.41
VPS13B-207ENST00000518569 UNCXA6NJT0 531 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 LINC01387J3KSC0 135 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-207ENST00000518569 FSCN2O14926 492 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 CTSHP09668 335 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 CHRNA4P43681 627 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 TRIM28Q13263 835 aaKnown RBP6.26□□□□□ -1.41
VPS13B-207ENST00000518569 SETDB1Q15047 1291 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 PRRT3Q5FWE3 981 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-207ENST00000518569 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
VPS13B-207ENST00000518569 CEP44Q9C0F1 390 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 SEC31BQ9NQW1 1179 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 AKAP2Q9Y2D5 859 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 USP31Q70CQ4 1352 aa6.26□□□□□ -1.41
VPS13B-207ENST00000518569 C19orf57Q0VDD7 668 aa6.25□□□□□ -1.41
VPS13B-207ENST00000518569 TAF1CQ15572 869 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-207ENST00000518569 TM4SF5O14894 197 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 DEAF1O75398 565 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-207ENST00000518569 SPATA31C1P0DKV0 1188 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 ELNP15502 786 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 FAAP100Q0VG06 881 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 SV2BQ7L1I2 683 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 TMEM39AQ9NV64 488 aa6.24□□□□□ -1.41
VPS13B-207ENST00000518569 KIAA1522Q9P206 1035 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-207ENST00000518569 DLL1O00548 723 aa6.23□□□□□ -1.41
VPS13B-207ENST00000518569 CDC25BP30305 580 aa6.23□□□□□ -1.41
VPS13B-207ENST00000518569 RBM25P49756 843 aaKnown RBP6.23□□□□□ -1.41
VPS13B-207ENST00000518569 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
VPS13B-207ENST00000518569 DOC2BQ14184 412 aa6.23□□□□□ -1.41
VPS13B-207ENST00000518569 TXNDC11Q6PKC3 985 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms