RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 DEFB132Q7Z7B7 95 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 NLGN1Q8N2Q7 840 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 MYRIPQ8NFW9 859 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 XAGE2Q96GT9 111 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 ZSCAN31Q96LW9 406 aaPredicted RBP21.65■■□□□ 1.06
SDC2-202ENST00000518385 CNNM1Q9NRU3 951 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 TAF5LO75529 589 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 KRT32Q14532 448 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 TTC39AQ5SRH9 613 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 PRPF40BQ6NWY9 871 aaKnown RBP21.65■■□□□ 1.06
SDC2-202ENST00000518385 C3orf67Q6ZVT6 689 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 NLRP3Q96P20 1036 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 UPF3BQ9BZI7 483 aaKnown RBP21.65■■□□□ 1.06
SDC2-202ENST00000518385 STK32BQ9NY57 414 aa21.65■■□□□ 1.06
SDC2-202ENST00000518385 U3KPZ7 1027 aaPredicted RBP21.65■■□□□ 1.06
SDC2-202ENST00000518385 RIC1Q4ADV7 1423 aa21.64■■□□□ 1.06
SDC2-202ENST00000518385 LRP5O75197 1615 aa21.64■■□□□ 1.05
SDC2-202ENST00000518385 ZFYP08048 801 aaPredicted RBP21.64■■□□□ 1.05
SDC2-202ENST00000518385 ZSCAN22P10073 491 aaPredicted RBP21.64■■□□□ 1.05
SDC2-202ENST00000518385 ATP2B3Q16720 1220 aa21.64■■□□□ 1.05
SDC2-202ENST00000518385 SMAP1Q8IYB5 467 aaPredicted RBP21.64■■□□□ 1.05
SDC2-202ENST00000518385 ALDH8A1Q9H2A2 487 aaPredicted RBP21.64■■□□□ 1.05
SDC2-202ENST00000518385 SEC31BQ9NQW1 1179 aa21.64■■□□□ 1.05
SDC2-202ENST00000518385 CYP46A1Q9Y6A2 500 aa21.64■■□□□ 1.05
SDC2-202ENST00000518385 SERPINB2P05120 415 aa21.63■■□□□ 1.05
SDC2-202ENST00000518385 USP48Q86UV5 1035 aa21.63■■□□□ 1.05
SDC2-202ENST00000518385 EDC3Q96F86 508 aaKnown RBP21.63■■□□□ 1.05
SDC2-202ENST00000518385 SH2B1Q9NRF2 756 aaPredicted RBP21.63■■□□□ 1.05
SDC2-202ENST00000518385 NSFL1CQ9UNZ2 370 aaKnown RBP21.63■■□□□ 1.05
SDC2-202ENST00000518385 LIMCH1Q9UPQ0 1083 aa21.63■■□□□ 1.05
SDC2-202ENST00000518385 GOLIM4O00461 696 aa21.62■■□□□ 1.05
SDC2-202ENST00000518385 SLC27A2O14975 620 aa21.62■■□□□ 1.05
SDC2-202ENST00000518385 PDE8BO95263 885 aa21.62■■□□□ 1.05
SDC2-202ENST00000518385 DDX46Q7L014 1031 aaKnown RBP21.62■■□□□ 1.05
SDC2-202ENST00000518385 VGLL2Q8N8G2 317 aa21.62■■□□□ 1.05
SDC2-202ENST00000518385 CNBD1Q8NA66 436 aa21.62■■□□□ 1.05
SDC2-202ENST00000518385 POLRMTO00411 1230 aaKnown RBP21.61■■□□□ 1.05
SDC2-202ENST00000518385 CASTP20810 708 aaKnown RBP21.61■■□□□ 1.05
SDC2-202ENST00000518385 ZMYM1Q5SVZ6 1142 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 PRR5LQ6MZQ0 368 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 RUFY3Q7L099 469 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 SPTLC3Q9NUV7 552 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 USP25Q9UHP3 1055 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.61■■□□□ 1.05
SDC2-202ENST00000518385 NPHP1O15259 732 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 RNF113AO15541 343 aaKnown RBP21.61■■□□□ 1.05
SDC2-202ENST00000518385 DDR1Q08345 913 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 CCDC24Q8N4L8 307 aa21.61■■□□□ 1.05
SDC2-202ENST00000518385 JAKMIP1Q96N16 626 aaKnown RBP21.61■■□□□ 1.05
SDC2-202ENST00000518385 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
SDC2-202ENST00000518385 GOLGA6L6A8MZA4 724 aa21.6■■□□□ 1.05
SDC2-202ENST00000518385 ANKRD1Q15327 319 aa21.6■■□□□ 1.05
SDC2-202ENST00000518385 ZNF589Q86UQ0 364 aaPredicted RBP21.6■■□□□ 1.05
SDC2-202ENST00000518385 DSCC1Q9BVC3 393 aa21.6■■□□□ 1.05
SDC2-202ENST00000518385 PDRG1Q9NUG6 133 aa21.6■■□□□ 1.05
SDC2-202ENST00000518385 UQCRFS1P1P0C7P4 283 aa21.59■■□□□ 1.05
SDC2-202ENST00000518385 IGHMBP2P38935 993 aaKnown RBP21.59■■□□□ 1.05
SDC2-202ENST00000518385 PUM3Q15397 648 aaKnown RBP21.59■■□□□ 1.05
SDC2-202ENST00000518385 LPIN2Q92539 896 aa21.59■■□□□ 1.05
SDC2-202ENST00000518385 MPHOSPH8Q99549 860 aa21.59■■□□□ 1.05
SDC2-202ENST00000518385 QSER1Q2KHR3 1735 aa21.58■■□□□ 1.05
SDC2-202ENST00000518385 STX6O43752 255 aa21.58■■□□□ 1.05
SDC2-202ENST00000518385 AK2P54819 239 aa21.58■■□□□ 1.05
SDC2-202ENST00000518385 TTF1Q15361 905 aaPredicted RBP21.58■■□□□ 1.05
SDC2-202ENST00000518385 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.05
SDC2-202ENST00000518385 ADORA1P30542 326 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 ST5P78524 1137 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 SMC3Q9UQE7 1217 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 CASZ1Q86V15 1759 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 F13A1P00488 732 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 RNF214Q8ND24 703 aa21.57■■□□□ 1.04
SDC2-202ENST00000518385 KDM4AO75164 1064 aa21.56■■□□□ 1.04
SDC2-202ENST00000518385 FGFR2P21802 821 aa21.56■■□□□ 1.04
SDC2-202ENST00000518385 NOLC1Q14978 699 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDC2-202ENST00000518385 ADCK5Q3MIX3 580 aa21.56■■□□□ 1.04
SDC2-202ENST00000518385 BLOC1S2Q6QNY1 142 aa21.56■■□□□ 1.04
SDC2-202ENST00000518385 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDC2-202ENST00000518385 NDUFB9Q9Y6M9 179 aa21.56■■□□□ 1.04
SDC2-202ENST00000518385 ARAP2Q8WZ64 1704 aa21.55■■□□□ 1.04
SDC2-202ENST00000518385 SLC5A1P13866 664 aa21.55■■□□□ 1.04
SDC2-202ENST00000518385 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
SDC2-202ENST00000518385 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.047e-6■□□□□ 9.9
SDC2-202ENST00000518385 BSDC1Q9NW68 430 aaPredicted RBP21.55■■□□□ 1.04
SDC2-202ENST00000518385 HMGB1P09429 215 aaKnown RBP21.54■■□□□ 1.04
SDC2-202ENST00000518385 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
SDC2-202ENST00000518385 CCDC94Q9BW85 323 aaPredicted RBP21.54■■□□□ 1.04
SDC2-202ENST00000518385 MMP10P09238 476 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 RPS6KB1P23443 525 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 CRY2Q49AN0 593 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
SDC2-202ENST00000518385 FUCA2Q9BTY2 467 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 PARP3Q9Y6F1 533 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 ELP1O95163 1332 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 TNRC6CQ9HCJ0 1690 aaKnown RBP21.53■■□□□ 1.04
SDC2-202ENST00000518385 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
SDC2-202ENST00000518385 GADD45BO75293 160 aaPredicted RBP21.53■■□□□ 1.04
SDC2-202ENST00000518385 ADCY5O95622 1261 aa21.53■■□□□ 1.04
SDC2-202ENST00000518385 PDCP20941 246 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms