RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
BRD9-216ENST00000518251 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
BRD9-216ENST00000518251 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 AK9Q5TCS8 1911 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
BRD9-216ENST00000518251 SDSP20132 328 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 MAP2K2P36507 400 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 GMPSP49915 693 aaPredicted RBP12.82□□□□□ -0.36
BRD9-216ENST00000518251 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
BRD9-216ENST00000518251 CXCL9Q07325 125 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
BRD9-216ENST00000518251 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
BRD9-216ENST00000518251 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
BRD9-216ENST00000518251 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 CA12O43570 354 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 TRPM4Q8TD43 1214 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 ZNRF3Q9ULT6 936 aa12.81□□□□□ -0.36
BRD9-216ENST00000518251 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
BRD9-216ENST00000518251 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 TAF1P21675 1872 aa12.8□□□□□ -0.36
BRD9-216ENST00000518251 SHTN1A0MZ66 631 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 YDJCA8MPS7 323 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 PDE8BO95263 885 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
BRD9-216ENST00000518251 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
BRD9-216ENST00000518251 CASC1Q6TDU7 716 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
BRD9-216ENST00000518251 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
BRD9-216ENST00000518251 ATP5JP18859 108 aa12.78□□□□□ -0.36
BRD9-216ENST00000518251 TIMM10P62072 90 aa12.78□□□□□ -0.36
BRD9-216ENST00000518251 CHRNDQ07001 517 aa12.78□□□□□ -0.36
BRD9-216ENST00000518251 GRAPQ13588 217 aa12.78□□□□□ -0.36
BRD9-216ENST00000518251 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
BRD9-216ENST00000518251 DPP8Q6V1X1 898 aaPredicted RBP12.78□□□□□ -0.36
BRD9-216ENST00000518251 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
BRD9-216ENST00000518251 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
BRD9-216ENST00000518251 RBM19Q9Y4C8 960 aaKnown RBP12.78□□□□□ -0.36
BRD9-216ENST00000518251 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
BRD9-216ENST00000518251 RAD17O75943 681 aa12.77□□□□□ -0.37
BRD9-216ENST00000518251 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.37
BRD9-216ENST00000518251 SLC5A1P13866 664 aa12.77□□□□□ -0.37
BRD9-216ENST00000518251 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
BRD9-216ENST00000518251 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
BRD9-216ENST00000518251 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
BRD9-216ENST00000518251 ZIC5Q96T25 663 aa12.77□□□□□ -0.37
BRD9-216ENST00000518251 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.37
BRD9-216ENST00000518251 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
BRD9-216ENST00000518251 SEC24BO95487 1268 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 FGFR2P21802 821 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 ADORA1P30542 326 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
BRD9-216ENST00000518251 NOGQ13253 232 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 TTC39AQ5SRH9 613 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
BRD9-216ENST00000518251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.76□□□□□ -0.37
BRD9-216ENST00000518251 LPIN2Q92539 896 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
BRD9-216ENST00000518251 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
BRD9-216ENST00000518251 EGFRP00533 1210 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
BRD9-216ENST00000518251 RFX7Q2KHR2 1363 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 DLK2Q6UY11 383 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 MPNDQ8N594 471 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 HAUS7Q99871 368 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
BRD9-216ENST00000518251 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
BRD9-216ENST00000518251 TAF5LO75529 589 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 BBOX1O75936 387 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 HUNKP57058 714 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 DGKZQ13574 1117 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 TNIP1Q15025 636 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 DNAJC2Q99543 621 aaKnown RBP12.74□□□□□ -0.37
BRD9-216ENST00000518251 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
BRD9-216ENST00000518251 TNRC18O15417 2968 aaPredicted RBP12.73□□□□□ -0.37
BRD9-216ENST00000518251 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
BRD9-216ENST00000518251 CHMLP26374 656 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms