RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
PABPC1-203ENST00000517921 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
PABPC1-203ENST00000517921 MPNDQ8N594 471 aa12.81□□□□□ -0.36
PABPC1-203ENST00000517921 DIAPH3Q9NSV4 1193 aa12.81□□□□□ -0.36
PABPC1-203ENST00000517921 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
PABPC1-203ENST00000517921 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
PABPC1-203ENST00000517921 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
PABPC1-203ENST00000517921 SBF1O95248 1867 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 C6orf229H3BNL8 230 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 SEMA3EO15041 775 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-203ENST00000517921 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-203ENST00000517921 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 PIH1D3Q9NQM4 214 aaKnown RBP12.8□□□□□ -0.36
PABPC1-203ENST00000517921 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-203ENST00000517921 ECM29Q5VYK3 1845 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 RAD50Q92878 1312 aa12.8□□□□□ -0.36
PABPC1-203ENST00000517921 BAZ2AQ9UIF9 1905 aaKnown RBP12.8□□□□□ -0.36
PABPC1-203ENST00000517921 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 SGSM2O43147 1006 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 CHGBP05060 677 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-203ENST00000517921 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
PABPC1-203ENST00000517921 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
PABPC1-203ENST00000517921 FAM227BQ96M60 508 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 RTFDC1Q9BY42 306 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-203ENST00000517921 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-203ENST00000517921 DENND2AQ9ULE3 1009 aa12.79□□□□□ -0.36
PABPC1-203ENST00000517921 C21orf2O43822 256 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
PABPC1-203ENST00000517921 IL1R1P14778 569 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 CCDC93Q567U6 631 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-203ENST00000517921 UTRNP46939 3433 aa12.78□□□□□ -0.36
PABPC1-203ENST00000517921 LAMB1P07942 1786 aa12.77□□□□□ -0.36
PABPC1-203ENST00000517921 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
PABPC1-203ENST00000517921 REC8O95072 547 aa12.77□□□□□ -0.37
PABPC1-203ENST00000517921 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-203ENST00000517921 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
PABPC1-203ENST00000517921 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
PABPC1-203ENST00000517921 EYA3Q99504 573 aa12.77□□□□□ -0.37
PABPC1-203ENST00000517921 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
PABPC1-203ENST00000517921 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
PABPC1-203ENST00000517921 COL4A5P29400 1685 aa12.77□□□□□ -0.37
PABPC1-203ENST00000517921 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 ADD2P35612 726 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 ARHGAP27Q6ZUM4 889 aa12.76□□□□□ -0.37
PABPC1-203ENST00000517921 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.76□□□□□ -0.37
PABPC1-203ENST00000517921 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 MAST3O60307 1309 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 PDE6AP16499 860 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
PABPC1-203ENST00000517921 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 APPBP2Q92624 585 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 USP26Q9BXU7 913 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 ZC3H12CQ9C0D7 883 aaKnown RBP12.75□□□□□ -0.37
PABPC1-203ENST00000517921 COA1Q9GZY4 146 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
PABPC1-203ENST00000517921 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 M0R2C6 588 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
PABPC1-203ENST00000517921 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 MCMDC2Q4G0Z9 681 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 SUPT20HQ8NEM7 779 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 PSMD1Q99460 953 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
PABPC1-203ENST00000517921 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 MYH1P12882 1939 aa12.74□□□□□ -0.37
PABPC1-203ENST00000517921 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
PABPC1-203ENST00000517921 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
PABPC1-203ENST00000517921 KIAA2012Q0VF49 1180 aa12.73□□□□□ -0.37
PABPC1-203ENST00000517921 AOC3Q16853 763 aa12.73□□□□□ -0.37
PABPC1-203ENST00000517921 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms