RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 TRIM11Q96F44 468 aa8.7□□□□□ -1.02
FAM49B-204ENST00000517801 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
FAM49B-204ENST00000517801 FAM8A1Q9UBU6 413 aa8.7□□□□□ -1.02
FAM49B-204ENST00000517801 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
FAM49B-204ENST00000517801 RECKO95980 971 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 XRCC5P13010 732 aaKnown RBP8.69□□□□□ -1.02
FAM49B-204ENST00000517801 EPHA1P21709 976 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 ITPKAP23677 461 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 GSTT1P30711 240 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 FCGRTP55899 365 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 PTPN12Q05209 780 aaKnown RBP8.69□□□□□ -1.02
FAM49B-204ENST00000517801 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 DTHD1Q6ZMT9 781 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 PLVAPQ9BX97 442 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 CNTNAP5Q8WYK1 1306 aa8.69□□□□□ -1.02
FAM49B-204ENST00000517801 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 H3BRJ5 948 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 ILDR2Q71H61 639 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 CRELD1Q96HD1 420 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 ZNF576Q9H609 170 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 ZFYVE1Q9HBF4 777 aa8.68□□□□□ -1.02
FAM49B-204ENST00000517801 NOP53Q9NZM5 478 aaKnown RBP8.68□□□□□ -1.02
FAM49B-204ENST00000517801 LINC01387J3KSC0 135 aa8.67□□□□□ -1.02
FAM49B-204ENST00000517801 USP17L7P0C7H9 530 aa8.67□□□□□ -1.02
FAM49B-204ENST00000517801 CDC25BP30305 580 aa8.67□□□□□ -1.02
FAM49B-204ENST00000517801 TSNAXIP1Q2TAA8 658 aa8.67□□□□□ -1.02
FAM49B-204ENST00000517801 FAM117BQ6P1L5 589 aa8.67□□□□□ -1.02
FAM49B-204ENST00000517801 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
FAM49B-204ENST00000517801 IKBKEQ14164 716 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 C3orf58Q8NDZ4 430 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 BACH2Q9BYV9 841 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 IGSF5Q9NSI5 407 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
FAM49B-204ENST00000517801 A0A0A0MRY4 1105 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 TCF3P15923 654 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 RAC1P63000 192 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 PCDH1Q08174 1060 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 RPS26P11Q5JNZ5 115 aaPredicted RBP8.65□□□□□ -1.02
FAM49B-204ENST00000517801 MAP4K3Q8IVH8 894 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 WNT8BQ93098 351 aa8.65□□□□□ -1.02
FAM49B-204ENST00000517801 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
FAM49B-204ENST00000517801 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
FAM49B-204ENST00000517801 ESRRAP11474 423 aaPredicted RBP8.64□□□□□ -1.03
FAM49B-204ENST00000517801 PIP4K2BP78356 416 aa8.64□□□□□ -1.03
FAM49B-204ENST00000517801 TRIM28Q13263 835 aaKnown RBP8.64□□□□□ -1.03
FAM49B-204ENST00000517801 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
FAM49B-204ENST00000517801 METTL5Q9NRN9 209 aaKnown RBP8.64□□□□□ -1.03
FAM49B-204ENST00000517801 PPM1HQ9ULR3 514 aa8.64□□□□□ -1.03
FAM49B-204ENST00000517801 FSCN2O14926 492 aa8.63□□□□□ -1.03
FAM49B-204ENST00000517801 SETDB1Q15047 1291 aa8.63□□□□□ -1.03
FAM49B-204ENST00000517801 PRRT3Q5FWE3 981 aa8.63□□□□□ -1.03
FAM49B-204ENST00000517801 FMR1NBQ8N0W7 255 aaPredicted RBP8.63□□□□□ -1.03
FAM49B-204ENST00000517801 SLC7A3Q8WY07 619 aa8.63□□□□□ -1.03
FAM49B-204ENST00000517801 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 SOX1O00570 391 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 DEAF1O75398 565 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 B3GALT4O96024 378 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 CTSHP09668 335 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 ARL4DP49703 201 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 ZNF423Q2M1K9 1284 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 LDLRAD1Q5T700 205 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 KLHL23Q8NBE8 558 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 DCAF11Q8TEB1 546 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 ANKRD24Q8TF21 1146 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 SOX17Q9H6I2 414 aaPredicted RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 OSGEPQ9NPF4 335 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
FAM49B-204ENST00000517801 TTF2Q9UNY4 1162 aaKnown RBP8.62□□□□□ -1.03
FAM49B-204ENST00000517801 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 C19orf57Q0VDD7 668 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 FBXO11Q86XK2 927 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 GPN3Q9UHW5 284 aaPredicted RBP8.61□□□□□ -1.03
FAM49B-204ENST00000517801 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
FAM49B-204ENST00000517801 SPATA31C1P0DKV0 1188 aa8.6□□□□□ -1.03
FAM49B-204ENST00000517801 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
FAM49B-204ENST00000517801 TPTE2Q6XPS3 522 aa8.6□□□□□ -1.03
FAM49B-204ENST00000517801 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
FAM49B-204ENST00000517801 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
FAM49B-204ENST00000517801 CEP44Q9C0F1 390 aa8.6□□□□□ -1.03
FAM49B-204ENST00000517801 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
FAM49B-204ENST00000517801 ELNP15502 786 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 COL8A1P27658 744 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 ZNF76P36508 570 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
FAM49B-204ENST00000517801 MEI1Q5TIA1 1274 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 HGSNATQ68CP4 663 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 KLHDC7BQ96G42 594 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
FAM49B-204ENST00000517801 DLL1O00548 723 aa8.58□□□□□ -1.04
FAM49B-204ENST00000517801 TM4SF5O14894 197 aa8.58□□□□□ -1.04
FAM49B-204ENST00000517801 FBXO24O75426 580 aa8.58□□□□□ -1.04
FAM49B-204ENST00000517801 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
FAM49B-204ENST00000517801 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms