RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
TRAPPC9-203ENST00000517667 SP3Q02447 781 aa14.7□□□□□ -0.06
TRAPPC9-203ENST00000517667 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
TRAPPC9-203ENST00000517667 CD209Q9NNX6 404 aa14.7□□□□□ -0.06
TRAPPC9-203ENST00000517667 NEURL1BA8MQ27 555 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 ITGA6P23229 1130 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 KLRK1P26718 216 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 FXR1P51114 621 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 ANKRD13AQ8IZ07 590 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 C8orf58Q8NAV2 365 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 PLA2G12BQ9BX93 195 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 STK31Q9BXU1 1019 aa14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC9-203ENST00000517667 TESPA1A2RU30 521 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 H7C1W4 665 aa14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 EN2P19622 333 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 FKBP1AP62942 108 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 CWF19L2Q2TBE0 894 aaKnown RBP14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 NBPF11Q86T75 865 aa14.68□□□□□ -0.06
TRAPPC9-203ENST00000517667 ARAP2Q8WZ64 1704 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 CHRNDQ07001 517 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 TNFAIP1Q13829 316 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 CFAP100Q494V2 611 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 C15orf52Q6ZUT6 534 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 ZNF804AQ7Z570 1209 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 CERS5Q8N5B7 392 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 ZNF333Q96JL9 665 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 VEZTQ9HBM0 779 aa14.67□□□□□ -0.06
TRAPPC9-203ENST00000517667 CLRN2A0PK11 232 aa14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 IL1R1P14778 569 aa14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 SLC9C1Q4G0N8 1177 aa14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 NBPF12Q5TAG4 269 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 PTPN18Q99952 460 aa14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 MYH16Q9H6N6 1097 aa14.66□□□□□ -0.06
TRAPPC9-203ENST00000517667 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 ANKRD18BA2A2Z9 1011 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 F8W031 263 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 APAF1O14727 1248 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 USP2O75604 605 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 CSF1RP07333 972 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 GJA5P36382 358 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 GCKRQ14397 625 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 OPTNQ96CV9 577 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 PRMT6Q96LA8 375 aaPredicted RBP14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 CEP290O15078 2479 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 IRS2Q9Y4H2 1338 aa14.65□□□□□ -0.06
TRAPPC9-203ENST00000517667 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-203ENST00000517667 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAPPC9-203ENST00000517667 RASA3Q14644 834 aa14.64□□□□□ -0.07
TRAPPC9-203ENST00000517667 ZFYVE28Q9HCC9 887 aa14.64□□□□□ -0.07
TRAPPC9-203ENST00000517667 GTF2A2P52657 109 aa14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 TAF1CQ15572 869 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 ELP3Q9H9T3 547 aa14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 COLQQ9Y215 455 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 PCDHAC2Q9Y5I4 1007 aa14.63□□□□□ -0.07
TRAPPC9-203ENST00000517667 TAF5LO75529 589 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 CASP7P55210 303 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 IFIT5Q13325 482 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 MS4A4AQ96JQ5 239 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 SERPINA10Q9UK55 444 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 PTCH2Q9Y6C5 1203 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 SZT2Q5T011 3432 aa14.62□□□□□ -0.07
TRAPPC9-203ENST00000517667 CCL15-CCL14A0A0B4J2E2 113 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 GNRH1P01148 92 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 CAP1Q01518 475 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 KIF22Q14807 665 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 CCL15Q16663 113 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 LINS1Q8NG48 757 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 CSADQ9Y600 493 aa14.61□□□□□ -0.07
TRAPPC9-203ENST00000517667 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 TNNI2P48788 182 aa14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 TWISTNBQ3B726 338 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 DNAAF4Q8WXU2 420 aa14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 BRI3BPQ8WY22 251 aa14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 ZCCHC17Q9NP64 241 aaKnown RBP14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 ZNF70Q9UC06 446 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 FAM205AQ6ZU69 1335 aa14.6□□□□□ -0.07
TRAPPC9-203ENST00000517667 SNAP23O00161 211 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 MAP3K9P80192 1104 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 FLIIQ13045 1269 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 DDX10Q13206 875 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 FKBP5Q13451 457 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 VGLL4Q14135 290 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 G2E3Q7L622 706 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 HELBQ8NG08 1087 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 TSR2Q969E8 191 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 TEPSINQ96N21 525 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 TTF2Q9UNY4 1162 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 AOX1Q06278 1338 aa14.59□□□□□ -0.07
TRAPPC9-203ENST00000517667 ZSWIM8A7E2V4 1837 aa14.58□□□□□ -0.08
TRAPPC9-203ENST00000517667 H0YGN5 161 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms