RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 NOC4LQ9BVI4 516 aaKnown RBP5.08□□□□□ -1.6
SKP1-203ENST00000517625 NOP53Q9NZM5 478 aaKnown RBP5.08□□□□□ -1.6
SKP1-203ENST00000517625 TRIM33Q9UPN9 1127 aa5.08□□□□□ -1.6
SKP1-203ENST00000517625 USP31Q70CQ4 1352 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 GNB5O14775 395 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 B3GALT4O96024 378 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 NID1P14543 1247 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 FCGRTP55899 365 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 PIP4K2BP78356 416 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 HNRNPUQ00839 825 aaKnown RBP eCLIP5.07□□□□□ -1.6
SKP1-203ENST00000517625 MSL1Q68DK7 614 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 SV2BQ7L1I2 683 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 PODNQ7Z5L7 613 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 WHAMMQ8TF30 809 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 NUDT8Q8WV74 236 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 FAM161BQ96MY7 647 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 HHIPQ96QV1 700 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 OSGEPQ9NPF4 335 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 MKL2Q9ULH7 1088 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 PPME1Q9Y570 386 aa5.07□□□□□ -1.6
SKP1-203ENST00000517625 FAM181BA6NEQ2 426 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 CTSHP09668 335 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 HOXB4P17483 251 aaPredicted RBP5.06□□□□□ -1.6
SKP1-203ENST00000517625 ARL4DP49703 201 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 PPP2R3AQ06190 1150 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 PCDH1Q08174 1060 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 IKBKEQ14164 716 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 TSNAXIP1Q2TAA8 658 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 SCARA3Q6AZY7 606 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 GDF6Q6KF10 455 aaPredicted RBP5.06□□□□□ -1.6
SKP1-203ENST00000517625 ILDR2Q71H61 639 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 VN1R5Q7Z5H4 357 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 ALYREFQ86V81 257 aaKnown RBP5.06□□□□□ -1.6
SKP1-203ENST00000517625 IL22RA1Q8N6P7 574 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 KLHL23Q8NBE8 558 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 ZNF428Q96B54 188 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 BACH2Q9BYV9 841 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 RNF19AQ9NV58 838 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 TTF2Q9UNY4 1162 aaKnown RBP5.06□□□□□ -1.6
SKP1-203ENST00000517625 SAMM50Q9Y512 469 aa5.06□□□□□ -1.6
SKP1-203ENST00000517625 TRPA1O75762 1119 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 TCF3P15923 654 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 EPHA1P21709 976 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 BAG6P46379 1132 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 RAC1P63000 192 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 AP3B2Q13367 1082 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 PWP1Q13610 501 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 COL9A3Q14050 684 aaPredicted RBP5.05□□□□□ -1.6
SKP1-203ENST00000517625 SPRED3Q2MJR0 410 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 HP1BP3Q5SSJ5 553 aaPredicted RBP5.05□□□□□ -1.6
SKP1-203ENST00000517625 TMEM87AQ8NBN3 555 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 LACRTQ9GZZ8 138 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 RRAGCQ9HB90 399 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 TMEM39AQ9NV64 488 aa5.05□□□□□ -1.6
SKP1-203ENST00000517625 METTL12A8MUP2 240 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 ESRRAP11474 423 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 ZNF76P36508 570 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 RANGAP1P46060 587 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 C19orf57Q0VDD7 668 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 LDLRAD1Q5T700 205 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 LINC00114Q6XXX2 140 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 HS2ST1Q7LGA3 356 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 BEND7Q8N7W2 519 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 SCARF2Q96GP6 870 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 NECAB3Q96P71 396 aaPredicted RBP5.04□□□□□ -1.6
SKP1-203ENST00000517625 SEC31BQ9NQW1 1179 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 IGSF5Q9NSI5 407 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 AKAP2Q9Y2D5 859 aa5.04□□□□□ -1.6
SKP1-203ENST00000517625 RNF225M0QZC1 329 aaPredicted RBP5.03□□□□□ -1.6
SKP1-203ENST00000517625 RPS26P62854 115 aaKnown RBP5.03□□□□□ -1.6
SKP1-203ENST00000517625 FANCCQ00597 558 aa5.03□□□□□ -1.6
SKP1-203ENST00000517625 CCDC85BQ15834 202 aaPredicted RBP5.03□□□□□ -1.6
SKP1-203ENST00000517625 RNF34Q969K3 372 aa5.03□□□□□ -1.6
SKP1-203ENST00000517625 EMILIN2Q9BXX0 1053 aa5.03□□□□□ -1.6
SKP1-203ENST00000517625 SH2B1Q9NRF2 756 aaPredicted RBP5.03□□□□□ -1.6
SKP1-203ENST00000517625 GPN3Q9UHW5 284 aaPredicted RBP5.03□□□□□ -1.6
SKP1-203ENST00000517625 FSCN2O14926 492 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 CYP11A1P05108 521 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 SUZ12Q15022 739 aaKnown RBP5.02□□□□□ -1.61
SKP1-203ENST00000517625 PRRT3Q5FWE3 981 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 MEI1Q5TIA1 1274 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 DIEXFQ68CQ4 756 aaKnown RBP5.02□□□□□ -1.61
SKP1-203ENST00000517625 C8orf86Q6ZUL3 223 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 ERMP1Q7Z2K6 904 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 FBXO11Q86XK2 927 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 TRIM11Q96F44 468 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 RSRP1Q9BUV0 290 aa5.02□□□□□ -1.61
SKP1-203ENST00000517625 A0A0A0MRY4 1105 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 LINC01387J3KSC0 135 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 ENC1O14682 589 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 ELNP15502 786 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 NME2P22392 152 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 SNRPNP63162 240 aaKnown RBP5.01□□□□□ -1.61
SKP1-203ENST00000517625 FAAP100Q0VG06 881 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 SETDB1Q15047 1291 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 LRRC14Q15048 493 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 ZNF423Q2M1K9 1284 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 TRAPPC3LQ5T215 181 aa5.01□□□□□ -1.61
SKP1-203ENST00000517625 ADAMTSL4Q6UY14 1074 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms