RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 DDX46Q7L014 1031 aaKnown RBP11.3□□□□□ -0.6
VIRMA-203ENST00000517624 KLHDC4Q8TBB5 520 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
VIRMA-203ENST00000517624 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
VIRMA-203ENST00000517624 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
VIRMA-203ENST00000517624 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
VIRMA-203ENST00000517624 TGFB2P61812 414 aa11.29□□□□□ -0.6
VIRMA-203ENST00000517624 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
VIRMA-203ENST00000517624 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
VIRMA-203ENST00000517624 CELF1Q92879 486 aaKnown RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 MASTLQ96GX5 879 aa11.29□□□□□ -0.6
VIRMA-203ENST00000517624 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
VIRMA-203ENST00000517624 PALD1Q9ULE6 856 aa11.29□□□□□ -0.6
VIRMA-203ENST00000517624 TAF1P21675 1872 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 COL4A1P02462 1669 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 EYA2O00167 538 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 CIAO1O76071 339 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 KCNA3P22001 575 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 CHRNA5P30532 468 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 ALDH1B1P30837 517 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 GRAPQ13588 217 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
VIRMA-203ENST00000517624 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
VIRMA-203ENST00000517624 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
VIRMA-203ENST00000517624 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
VIRMA-203ENST00000517624 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
VIRMA-203ENST00000517624 BBOX1O75936 387 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 SASH1O94885 1247 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 BRD1O95696 1058 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.61
VIRMA-203ENST00000517624 DPEP1P16444 411 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
VIRMA-203ENST00000517624 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
VIRMA-203ENST00000517624 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 AACSQ86V21 672 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 ANKRD18AQ8IVF6 992 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 KCNB2Q92953 911 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 TM6SF1Q9BZW5 370 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 SIL1Q9H173 461 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
VIRMA-203ENST00000517624 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
VIRMA-203ENST00000517624 LRP5O75197 1615 aa11.27□□□□□ -0.61
VIRMA-203ENST00000517624 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 ZNF445P59923 1031 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 MCTP1Q6DN14 999 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 ZNF622Q969S3 477 aaKnown RBP eCLIP11.26□□□□□ -0.61
VIRMA-203ENST00000517624 TTC14Q96N46 770 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 MPHOSPH8Q99549 860 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 IL25Q9H293 177 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 LMBRD1Q9NUN5 540 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 SNX14Q9Y5W7 946 aa11.26□□□□□ -0.61
VIRMA-203ENST00000517624 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
VIRMA-203ENST00000517624 MAP4K4O95819 1239 aaPredicted RBP11.25□□□□□ -0.61
VIRMA-203ENST00000517624 MBD3O95983 291 aa11.25□□□□□ -0.61
VIRMA-203ENST00000517624 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
VIRMA-203ENST00000517624 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
VIRMA-203ENST00000517624 ZDHHC9Q9Y397 364 aa11.25□□□□□ -0.61
VIRMA-203ENST00000517624 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
VIRMA-203ENST00000517624 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 CWC27Q6UX04 472 aaKnown RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 ZNF710Q8N1W2 664 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 PPP1R1BQ9UD71 204 aaPredicted RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
VIRMA-203ENST00000517624 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
VIRMA-203ENST00000517624 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 CHRNDQ07001 517 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 TFCP2Q12800 502 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PKP1Q13835 747 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 METTL24Q5JXM2 366 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms