RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PDE1AP54750 535 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 GRIK5Q16478 980 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
CLN8-202ENST00000517514 MYH7P12883 1935 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 PSMD14O00487 310 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 RAD17O75943 681 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 MX1P20591 662 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 ZAP70P43403 619 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 GTF2IP78347 998 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLN8-202ENST00000517514 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
CLN8-202ENST00000517514 GMLQ99445 158 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
CLN8-202ENST00000517514 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
CLN8-202ENST00000517514 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 CYP2E1P05181 493 aaPredicted RBP12.1□□□□□ -0.47
CLN8-202ENST00000517514 VIL1P09327 827 aaKnown RBP12.1□□□□□ -0.47
CLN8-202ENST00000517514 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 TTC39AQ5SRH9 613 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 JDP2Q8WYK2 163 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 MAST2Q6P0Q8 1798 aa12.1□□□□□ -0.47
CLN8-202ENST00000517514 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 SEMA3EO15041 775 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
CLN8-202ENST00000517514 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 SPATA5Q8NB90 893 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 ZNF384Q8TF68 577 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 HAUS7Q99871 368 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 PIH1D3Q9NQM4 214 aaKnown RBP12.09□□□□□ -0.47
CLN8-202ENST00000517514 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 AOX1Q06278 1338 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
CLN8-202ENST00000517514 WDR90Q96KV7 1748 aa12.08□□□□□ -0.47
CLN8-202ENST00000517514 MYH2Q9UKX2 1941 aa12.08□□□□□ -0.48
CLN8-202ENST00000517514 SHTN1A0MZ66 631 aa12.08□□□□□ -0.48
CLN8-202ENST00000517514 G3V3G9 751 aa12.08□□□□□ -0.48
CLN8-202ENST00000517514 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
CLN8-202ENST00000517514 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
CLN8-202ENST00000517514 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
CLN8-202ENST00000517514 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
CLN8-202ENST00000517514 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
CLN8-202ENST00000517514 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.48
CLN8-202ENST00000517514 GLRX3O76003 335 aaKnown RBP12.07□□□□□ -0.48
CLN8-202ENST00000517514 DDNO94850 711 aaPredicted RBP12.07□□□□□ -0.48
CLN8-202ENST00000517514 MAP4K4O95819 1239 aaPredicted RBP12.07□□□□□ -0.48
CLN8-202ENST00000517514 CHGBP05060 677 aa12.07□□□□□ -0.48
CLN8-202ENST00000517514 PRDX5P30044 214 aa12.07□□□□□ -0.48
CLN8-202ENST00000517514 FKBP1AP62942 108 aaKnown RBP12.07□□□□□ -0.48
CLN8-202ENST00000517514 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
CLN8-202ENST00000517514 POTECB2RU33 542 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 GMPSP49915 693 aaPredicted RBP12.06□□□□□ -0.48
CLN8-202ENST00000517514 SCNN1DP51172 638 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 EIF6P56537 245 aaKnown RBP12.06□□□□□ -0.48
CLN8-202ENST00000517514 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 TTC22Q5TAA0 569 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 WDR66Q8TBY9 1149 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
CLN8-202ENST00000517514 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
CLN8-202ENST00000517514 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
CLN8-202ENST00000517514 SCN4AP35499 1836 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 GOLIM4O00461 696 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 FRAT2O75474 233 aaPredicted RBP12.05□□□□□ -0.48
CLN8-202ENST00000517514 RGS3P49796 1198 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 TNIP1Q15025 636 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 SLFNL1Q499Z3 407 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 GPC2Q8N158 579 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 FBXW7Q969H0 707 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 PAG1Q9NWQ8 432 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
CLN8-202ENST00000517514 ECM29Q5VYK3 1845 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 ERC2O15083 957 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 EGFRP00533 1210 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 AGBL3Q8NEM8 1001 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 DPF2Q92785 391 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 GPATCH3Q96I76 525 aa12.04□□□□□ -0.48
CLN8-202ENST00000517514 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
CLN8-202ENST00000517514 TCRBV5S4A2TA0A5A2 114 aa12.03□□□□□ -0.48
CLN8-202ENST00000517514 EPS15P42566 896 aa12.03□□□□□ -0.48
CLN8-202ENST00000517514 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
CLN8-202ENST00000517514 ADGRA1Q86SQ6 560 aa12.03□□□□□ -0.48
CLN8-202ENST00000517514 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
CLN8-202ENST00000517514 NSUN4Q96CB9 384 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms