RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PTK7Q13308 1070 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 HIC1Q14526 733 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 NFKBIBQ15653 356 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 AOC3Q16853 763 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 COLEC12Q5KU26 742 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FDX2Q6P4F2 183 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ELMSAN1Q6PJG2 1045 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FERMT3Q86UX7 667 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CCDC125Q86Z20 511 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PLD6Q8N2A8 252 aaKnown RBP0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LINC01356Q8N9X3 169 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PANK1Q8TE04 598 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 BHMTQ93088 406 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 XAGE2Q96GT9 111 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LOXL4Q96JB6 756 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SIGLEC10Q96LC7 697 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PHOX2BQ99453 314 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RNF208Q9H0X6 261 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 MUC3BQ9H195 1237 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 IGFLR1Q9H665 355 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RAB6BQ9NRW1 208 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ADARB2Q9NS39 739 aaKnown RBP0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 MUC5BQ9HC84 5762 aaPredicted RBP0.28□□□□□ -2.37
RNU6-1238P-201ENST00000517215 AHNAKQ09666 5890 aaKnown RBP0.28□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MYOCOSA0A1B0GUC4 107 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CFAP99D6REC4 459 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MASP2O00187 686 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZFP36P26651 326 aaKnown RBP0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GDNFP39905 211 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GDF10P55107 478 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 C21orf58P58505 322 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZP2Q05996 745 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IFI16Q16666 785 aaKnown RBP0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 DUOXA2Q1HG44 320 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 USP43Q70EL4 1123 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NUTM1Q86Y26 1132 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GALNT11Q8NCW6 608 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CHST13Q8NET6 341 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ADAM32Q8TC27 787 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 EZH1Q92800 747 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CDK5RAP1Q96SZ6 601 aaKnown RBP0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TRIM8Q9BZR9 551 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 OSBPL3Q9H4L5 887 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 C19orf73Q9NVV2 129 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KCNK4Q9NYG8 393 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IRAK3Q9Y616 596 aa0.27□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TM4SF5O14894 197 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PER1O15534 1290 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KCNAB3O43448 404 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KCNC1P48547 511 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PCSK4Q6UW60 755 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IRF2BP1Q8IU81 584 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CACTIN-AS1Q8N1I8 211 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IL22RA1Q8N6P7 574 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KLHL23Q8NBE8 558 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TP53I13Q8NBR0 393 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ABHD4Q8TB40 342 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 UBASH3BQ8TF42 649 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 AIDAQ96BJ3 306 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 AGAP2Q99490 1192 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 OCSTAMPQ9BR26 566 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 YIPF2Q9BWQ6 316 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NIFKQ9BYG3 293 aaKnown RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SMG9Q9H0W8 520 aaKnown RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 VPS33BQ9H267 617 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MKNK2Q9HBH9 465 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 BRD7Q9NPI1 651 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KCNH4Q9UQ05 1017 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GPSM3Q9Y4H4 160 aa0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 GPC6Q9Y625 555 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZC3H4Q9UPT8 1303 aaKnown RBP0.26□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TMEM265A0A087WTH1 108 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 NPIPB8E9PQR5 432 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 AOC2O75106 756 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TIAF1O95411 115 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FBLN1P23142 703 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 KRTAP10-3P60369 221 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 MVKQ03426 396 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PTK2Q05397 1052 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SCRN1Q12765 414 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 IKZF1Q13422 519 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TLR1Q15399 786 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CYP27C1Q4G0S4 372 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ESCO1Q5FWF5 840 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 CDPF1Q6NVV7 123 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 SYCE2Q6PIF2 218 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 OGFOD3Q6PK18 319 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 BICDL1Q6ZP65 573 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 LDLRAD3Q86YD5 345 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF295-AS1Q8N0V1 137 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF366Q8N895 744 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 Q8N9P0 234 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 TRPM4Q8TD43 1214 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 FBLIM1Q8WUP2 373 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ASB11Q8WXH4 323 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 ZNF341Q9BYN7 854 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 EPB41L4AQ9HCS5 686 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 USP40Q9NVE5 1235 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PTGFRNQ9P2B2 879 aa0.25□□□□□ -2.37
RNU6-1238P-201ENST00000517215 PPME1Q9Y570 386 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms