RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 PHKA1P46020 1223 aa18.01■□□□□ 0.47
SCARNA21-201ENST00000517026 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
SCARNA21-201ENST00000517026 XAGE2Q96GT9 111 aa18.01■□□□□ 0.47
SCARNA21-201ENST00000517026 SCN9AQ15858 1988 aa18■□□□□ 0.47
SCARNA21-201ENST00000517026 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
SCARNA21-201ENST00000517026 CERS5Q8N5B7 392 aa18■□□□□ 0.47
SCARNA21-201ENST00000517026 AGBL3Q8NEM8 1001 aa18■□□□□ 0.47
SCARNA21-201ENST00000517026 H7C1D1 291 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 EGFRP00533 1210 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 HSPA1AP0DMV8 641 aaKnown RBP17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 HSPA1BP0DMV9 641 aaKnown RBP17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 TNNI3KQ59H18 835 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 RBM26Q5T8P6 1007 aaKnown RBP17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 TRPM4Q8TD43 1214 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 ADARB2Q9NS39 739 aaKnown RBP17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 FPGT-TNNI3KV9GXZ4 949 aa17.99■□□□□ 0.47
SCARNA21-201ENST00000517026 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 CAPN15O75808 1086 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 USP17L8P0C7I0 530 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 HIRAP54198 1017 aaPredicted RBP17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 TBC1D10BQ4KMP7 808 aaPredicted RBP17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 CCDC102BQ68D86 513 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 ERC1Q8IUD2 1116 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 RHPN1Q8TCX5 695 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 IL1RAPL2Q9NP60 686 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 GPR108Q9NPR9 543 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 ZNF609O15014 1411 aa17.98■□□□□ 0.47
SCARNA21-201ENST00000517026 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 EAF2Q96CJ1 260 aaPredicted RBP17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 DBNDD2Q9BQY9 259 aa17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 CCDC8Q9H0W5 538 aaPredicted RBP17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
SCARNA21-201ENST00000517026 F8W031 263 aaPredicted RBP17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 GRIK5Q16478 980 aa17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 MFSD14BQ5SR56 506 aa17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 GORABQ5T7V8 394 aa17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 USP50Q70EL3 339 aaPredicted RBP17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 LDHDQ86WU2 507 aa17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
SCARNA21-201ENST00000517026 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.46
SCARNA21-201ENST00000517026 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
SCARNA21-201ENST00000517026 KIF1BPQ96EK5 621 aa17.95■□□□□ 0.46
SCARNA21-201ENST00000517026 DCTPP1Q9H773 170 aa17.95■□□□□ 0.46
SCARNA21-201ENST00000517026 DBNLQ9UJU6 430 aaKnown RBP17.95■□□□□ 0.46
SCARNA21-201ENST00000517026 FKBP1AP62942 108 aaKnown RBP17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 RASGRF1Q13972 1273 aa17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 MAP1SQ66K74 1059 aaPredicted RBP17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 CHADLQ6NUI6 762 aa17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 AACSQ86V21 672 aa17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 COL1A1P02452 1464 aaPredicted RBP17.94■□□□□ 0.46
SCARNA21-201ENST00000517026 SMARCA5O60264 1052 aaPredicted RBP17.93■□□□□ 0.46
SCARNA21-201ENST00000517026 KIF4BQ2VIQ3 1234 aa17.93■□□□□ 0.46
SCARNA21-201ENST00000517026 OGFOD1Q8N543 542 aa17.93■□□□□ 0.46
SCARNA21-201ENST00000517026 MYOZ2Q9NPC6 264 aa17.93■□□□□ 0.46
SCARNA21-201ENST00000517026 ASTN2O75129 1339 aaPredicted RBP17.93■□□□□ 0.46
SCARNA21-201ENST00000517026 AAMPQ13685 434 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 SCARF1Q14162 830 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 PI16Q6UXB8 463 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 PCDHAC2Q9Y5I4 1007 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 SCN4AP35499 1836 aa17.92■□□□□ 0.46
SCARNA21-201ENST00000517026 SEMA3EO15041 775 aa17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 TTC39AQ5SRH9 613 aa17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 CLASRPQ8N2M8 674 aaKnown RBP17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 WDR66Q8TBY9 1149 aa17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 TTF2Q9UNY4 1162 aaKnown RBP17.91■□□□□ 0.46
SCARNA21-201ENST00000517026 UQCRFS1P1P0C7P4 283 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 ARID4AP29374 1257 aaPredicted RBP17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 NBPF9Q3BBW0 867 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 CCDC158Q5M9N0 1113 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 LRRCC1Q9C099 1032 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 PGAP2Q9UHJ9 254 aa17.9■□□□□ 0.46
SCARNA21-201ENST00000517026 ZBTB22O15209 634 aa17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 MCAMP43121 646 aa17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 SPATA5Q8NB90 893 aa17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 ZC3H15Q8WU90 426 aaKnown RBP17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 CREBZFQ9NS37 354 aa17.89■□□□□ 0.45
SCARNA21-201ENST00000517026 WNT10BO00744 389 aa17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 ITGBL1O95965 494 aaPredicted RBP17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 IFIT2P09913 472 aaKnown RBP17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 FMR1Q06787 632 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 DLGAP5Q15398 846 aa17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 DLK2Q6UY11 383 aa17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 ZBED3Q96IU2 234 aaPredicted RBP17.88■□□□□ 0.45
SCARNA21-201ENST00000517026 AOX1Q06278 1338 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms