RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 TRPM4Q8TD43 1214 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 MICAL1Q8TDZ2 1067 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CPLX3Q8WVH0 158 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 HNRNPLLQ8WVV9 542 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 GATAD2BQ8WXI9 593 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 APPBP2Q92624 585 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PNMA5Q96PV4 448 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 OSMRQ99650 979 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TRIM56Q9BRZ2 755 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCGF6Q9BYE7 350 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZCCHC2Q9C0B9 1178 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SLKQ9H2G2 1235 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF576Q9H609 170 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 RUBCNLQ9H714 662 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SPC25Q9HBM1 224 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SEC31BQ9NQW1 1179 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TYW1Q9NV66 732 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 NDFIP2Q9NV92 336 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TMEM260Q9NX78 707 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ACTR10Q9NZ32 417 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 UBP1Q9NZI7 540 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZFATQ9P243 1243 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 KANSL3Q9P2N6 904 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNRF3Q9ULT6 936 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CYP8B1Q9UNU6 501 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 AKAP2Q9Y2D5 859 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCDHGC4Q9Y5F7 938 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 COL4A3BPQ9Y5P4 624 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SENP3-EIF4A1A0A087X0R7 540 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 A0A096LPE4 126 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 A0A1W2PPZ6 126 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAM221BA6H8Z2 402 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MEIS3P2A8K0S8 358 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 H7C1W4 665 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TNFRSF10AO00220 468 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PDE2AO00408 941 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PPP1R12AO14974 1030 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 KHNYNO15037 678 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PDPK1O15530 556 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 CILPO75339 1184 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FBXO24O75426 580 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 ATE1O95260 518 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 B3GALT4O96024 378 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 F13A1P00488 732 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 VIL1P09327 827 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MAPTP10636 758 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 NFKB1P19838 968 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 NME2P22392 152 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TARSP26639 723 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SMCPP49901 116 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 GPLD1P80108 840 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAM160A1Q05DH4 1040 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SPEM2Q0P670 501 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAAP100Q0VG06 881 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SFSWAPQ12872 951 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 IFRD2Q12894 506 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 NEUROD1Q13562 356 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 LRRC14Q15048 493 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FXNQ16595 210 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SEZ6Q53EL9 994 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 C2orf27AQ580R0 203 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 DHX32Q7L7V1 743 aaKnown RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 REC114Q7Z4M0 266 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FILIP1Q7Z7B0 1213 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SPNS2Q8IVW8 549 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 CRIPAKQ8N1N5 446 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TAB3Q8N5C8 712 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAM169BQ8N8A8 192 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 ST13P5Q8NFI4 369 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 SH3TC2Q8TF17 1288 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 THAP3Q8WTV1 239 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 BSNDQ8WZ55 320 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 NXPE3Q969Y0 559 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 ANAPC16Q96DE5 110 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TRERF1Q96PN7 1200 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 CRBNQ96SW2 442 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 FEZ1Q99689 392 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PBX4Q9BYU1 374 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MIR1-1HGQ9H1L0 117 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 CLEC4MQ9H2X3 399 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 EHMT1Q9H9B1 1298 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 GPAMQ9HCL2 828 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCDH12Q9NPG4 1184 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TMEM39AQ9NV64 488 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 IFT57Q9NWB7 429 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MARK1Q9P0L2 795 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 ATXN7L1Q9ULK2 861 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 PPT2Q9UMR5 302 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MAPK8IP1Q9UQF2 711 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TLR6Q9Y2C9 796 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 MRVI1Q9Y6F6 885 aa1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.88□□□□□ -2.11
RN7SKP88-201ENST00000516847 LOC102724428A0A0B4J2F2 783 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 F6X3S4 739 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SMAD7O15105 426 aaKnown RBP1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 MARCH6O60337 910 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 PAGE1O75459 146 aa1.87□□□□□ -2.11
RN7SKP88-201ENST00000516847 SMNDC1O75940 238 aaKnown RBP eCLIP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms