RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PCDHGC4Q9Y5F7 938 aa6.16□□□□□ -1.42
RNU6-488P-201ENST00000515918 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.16□□□□□ -1.42
RNU6-488P-201ENST00000515918 A0A096LPE4 126 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 A0A1W2PPZ6 126 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 FAM221AA4D161 298 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 KHNYNO15037 678 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 U2SURPO15042 1029 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 PSAPP07602 524 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 MAPTP10636 758 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 RPS26P62854 115 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 PLEKHG4Q58EX7 1191 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 EFHC2Q5JST6 749 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 TMEM102Q8N9M5 508 aaPredicted RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 NSUN5Q96P11 429 aaKnown RBP6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 LRRC3Q9BY71 257 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 BRINP2Q9C0B6 783 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 ZNF576Q9H609 170 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 NDFIP2Q9NV92 336 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 IFT57Q9NWB7 429 aa6.15□□□□□ -1.42
RNU6-488P-201ENST00000515918 hCG_2014768A0A024R1R8 64 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 CCDC85CA6NKD9 419 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 CLSTN1O94985 981 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 GIPRP48546 466 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 IGBP1P78318 339 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 PLAURQ03405 335 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 SPEM2Q0P670 501 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 SCARF1Q14162 830 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 LBRQ14739 615 aaKnown RBP6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 RPS26P11Q5JNZ5 115 aaPredicted RBP6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 RAB44Q7Z6P3 723 aaPredicted RBP6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 SH3TC2Q8TF17 1288 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 DNAJC7Q99615 494 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 CCDC113Q9H0I3 377 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 ROBO2Q9HCK4 1378 aa6.14□□□□□ -1.43
RNU6-488P-201ENST00000515918 ZBTB42B2RXF5 422 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 BNIP3LO60238 219 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 BMP6P22004 513 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 ZNF157P51786 506 aaPredicted RBP6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 LAMC2Q13753 1193 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 FIGNL1Q6PIW4 674 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 DHX32Q7L7V1 743 aaKnown RBP6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 CCDC84Q86UT8 332 aaPredicted RBP6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 GATAD2BQ8WXI9 593 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 PNMA5Q96PV4 448 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 FANCLQ9NW38 375 aa6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 NOP58Q9Y2X3 529 aaKnown RBP6.13□□□□□ -1.43
RNU6-488P-201ENST00000515918 J3QW42 95 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 PDE2AO00408 941 aaPredicted RBP6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 MARCH6O60337 910 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 TNNI3KQ59H18 835 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 STK35Q8TDR2 534 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 ASAP3Q8TDY4 903 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 MICAL1Q8TDZ2 1067 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 JARID2Q92833 1246 aaPredicted RBP6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 BHMTQ93088 406 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 ZFP42Q96MM3 310 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 MUC3BQ9H195 1237 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 TNKS2Q9H2K2 1166 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 RASSF4Q9H2L5 321 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 ST7Q9NRC1 585 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 TMEM39AQ9NV64 488 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
RNU6-488P-201ENST00000515918 LOC102724428A0A0B4J2F2 783 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 ESYT3A0FGR9 886 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 CILPO75339 1184 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 AVPP01185 164 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 MCM4P33991 863 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 NRLP54845 237 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 SIK1P57059 783 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 CHMP4BP1P59074 171 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 ATP11AP98196 1134 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 CLCQ05315 142 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 SEPT6Q14141 434 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 MPP2Q14168 576 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 DBN1Q16643 649 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 DDR2Q16832 855 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 ADAMTSL4Q6UY14 1074 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 TRPM4Q8TD43 1214 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 PBX4Q9BYU1 374 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 BRMS1Q9HCU9 246 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 MARK1Q9P0L2 795 aa6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 GPN3Q9UHW5 284 aaPredicted RBP6.11□□□□□ -1.43
RNU6-488P-201ENST00000515918 DNAJC6O75061 913 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 CDC45O75419 566 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 CD33P20138 364 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 MLLT1Q03111 559 aaPredicted RBP6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 SQSTM1Q13501 440 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 ZNF423Q2M1K9 1284 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 RIPOR1Q6ZS17 1223 aa6.1□□□□□ -1.43
RNU6-488P-201ENST00000515918 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms