RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 SMTNP53814 917 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 FGD1P98174 961 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 CHRNA2Q15822 529 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 LDLRAD1Q5T700 205 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 NUTM2GQ5VZR2 741 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 MPNDQ8N594 471 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
SFXN1-211ENST00000515736 FAM129BQ96TA1 746 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 KIAA0232Q92628 1395 aa10.51□□□□□ -0.73
SFXN1-211ENST00000515736 LDHBP07195 334 aaKnown RBP10.5□□□□□ -0.73
SFXN1-211ENST00000515736 EHHADHQ08426 723 aa10.5□□□□□ -0.73
SFXN1-211ENST00000515736 NAALADL2Q58DX5 795 aa10.5□□□□□ -0.73
SFXN1-211ENST00000515736 IL16Q14005 1332 aa10.5□□□□□ -0.73
SFXN1-211ENST00000515736 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
SFXN1-211ENST00000515736 ERCC5P28715 1186 aaPredicted RBP10.49□□□□□ -0.73
SFXN1-211ENST00000515736 RPIAP49247 311 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 EVA1CP58658 441 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 PSMA6P60900 246 aaKnown RBP10.49□□□□□ -0.73
SFXN1-211ENST00000515736 HDLBPQ00341 1268 aaKnown RBP10.49□□□□□ -0.73
SFXN1-211ENST00000515736 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 PPP1R26Q5T8A7 1209 aaPredicted RBP10.49□□□□□ -0.73
SFXN1-211ENST00000515736 CCDC146Q8IYE0 955 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 TCP11L2Q8N4U5 519 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 MYO19Q96H55 970 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 PARP2Q9UGN5 583 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 LRFN2Q9ULH4 789 aa10.49□□□□□ -0.73
SFXN1-211ENST00000515736 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 MAPK8P45983 427 aa10.48□□□□□ -0.73
SFXN1-211ENST00000515736 R3HDM1Q15032 1099 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 RC3H1Q5TC82 1133 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 CCDC116Q8IYX3 515 aa10.48□□□□□ -0.73
SFXN1-211ENST00000515736 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
SFXN1-211ENST00000515736 ALKBH8Q96BT7 664 aaKnown RBP10.48□□□□□ -0.73
SFXN1-211ENST00000515736 SPATA31A1Q5TZJ5 1347 aa10.48□□□□□ -0.73
SFXN1-211ENST00000515736 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
SFXN1-211ENST00000515736 GPR182O15218 404 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 TRIM37O94972 964 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 NEFMP07197 916 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 U2AF1L5P0DN76 240 aaPredicted RBP10.47□□□□□ -0.73
SFXN1-211ENST00000515736 U2AF1Q01081 240 aaKnown RBP eCLIP10.47□□□□□ -0.73
SFXN1-211ENST00000515736 EXOC6Q8TAG9 804 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 XAGE2Q96GT9 111 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
SFXN1-211ENST00000515736 GGNBP2Q9H3C7 697 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 RAB6BQ9NRW1 208 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 ACEP12821 1306 aa10.47□□□□□ -0.73
SFXN1-211ENST00000515736 VIRMAQ69YN4 1812 aaKnown RBP10.47□□□□□ -0.73
SFXN1-211ENST00000515736 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 ZBTB39O15060 712 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.73
SFXN1-211ENST00000515736 NR5A1Q13285 461 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.73
SFXN1-211ENST00000515736 FAM26DQ5JW98 314 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 FAM196AQ6ZSG2 479 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 TMC4Q7Z404 712 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 FAM161BQ96MY7 647 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 IQSEC3Q9UPP2 1182 aaPredicted RBP10.46□□□□□ -0.73
SFXN1-211ENST00000515736 USP3Q9Y6I4 520 aa10.46□□□□□ -0.73
SFXN1-211ENST00000515736 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 SSH2Q76I76 1423 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 SIAH2O43255 324 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 APBA3O96018 575 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 ADH1CP00326 375 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 IL2RAP01589 272 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
SFXN1-211ENST00000515736 DAB2P98082 770 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 CENPQQ7L2Z9 268 aaPredicted RBP10.45□□□□□ -0.74
SFXN1-211ENST00000515736 PLEKHF1Q96S99 279 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
SFXN1-211ENST00000515736 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 RREB1Q92766 1687 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 OVOS2A0A0J9YW53 1432 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 DISP2A7MBM2 1401 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 USP6P35125 1406 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 OVOS2Q6IE36 1432 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 BRD2P25440 801 aaKnown RBP10.44□□□□□ -0.74
SFXN1-211ENST00000515736 GGCXP38435 758 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 KCNC4Q03721 635 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
SFXN1-211ENST00000515736 C9orf131Q5VYM1 1079 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 ATCAYQ86WG3 371 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 TMEM87AQ8NBN3 555 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 COG3Q96JB2 828 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 RNF19AQ9NV58 838 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 WWC3Q9ULE0 1092 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 CHMP3Q9Y3E7 222 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 HRH3Q9Y5N1 445 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 LMO7Q8WWI1 1683 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 CAMTA1Q9Y6Y1 1673 aa10.44□□□□□ -0.74
SFXN1-211ENST00000515736 KIF24Q5T7B8 1368 aa10.43□□□□□ -0.74
SFXN1-211ENST00000515736 CRBNQ96SW2 442 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms